BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028625
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   5e-11
gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...    70   2e-10
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    66   3e-09
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    66   3e-09
gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    64   1e-08

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/90 (42%), Positives = 49/90 (54%)
 Frame = -2

Query: 301 LFDLGSKGPRFTWSNRRSFNSHILERLDRTVANTSWVSLFLMVSVKTLVNAISDYLSLFI 122
           L DLG +GP+FTW+N R+  S I ERLDR + N+ W+ LF    V  L    SD+  L I
Sbjct: 172 LLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLI 231

Query: 121 NLNHVESSPPKPFRFFSLWSDDPTCRNIIE 32
             N    S   PFR   +W+  P   N+IE
Sbjct: 232 LFNENPRSESFPFRCKEVWAYHPDFTNVIE 261


>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/83 (40%), Positives = 48/83 (57%)
 Frame = -2

Query: 313 NDLGLFDLGSKGPRFTWSNRRSFNSHILERLDRTVANTSWVSLFLMVSVKTLVNAISDYL 134
           ++LGL DLG  GP +TWSN+++    +LERLDR +AN  W  LF   +V  L    SD+ 
Sbjct: 32  HNLGLIDLGYNGPAYTWSNKKNGCDLVLERLDRCLANVEWCMLFPHTTVYHLPMLYSDHA 91

Query: 133 SLFINLNHVESSPPKPFRFFSLW 65
            +   LN +   P K F+F + W
Sbjct: 92  PIIAILNPIHHHPKKSFKFENWW 114


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
 Frame = -2

Query: 313 NDLGLFDLGSKGPRFTWSNRRSFNSHILERLDRTVANTSWVSLFLMVSVKTLVNAISDYL 134
           +D GL DLG  GP+FTWSN++  NS+   RLDR VAN  +   F    V+ ++   SD+ 
Sbjct: 171 DDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHY 230

Query: 133 SLFINL---NHVESSPP--KPFRFFSLWSDDPTCRNIIENA 26
           ++ I+L   NH +   P  + FRF + W      R ++EN+
Sbjct: 231 AISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENS 271


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
           protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
 Frame = -2

Query: 313 NDLGLFDLGSKGPRFTWSNRRSFNSHILERLDRTVANTSWVSLFLMVSVKTLVNAISDYL 134
           +D GL DLG  GP+FTWSN++  NS+   RLDR VAN  +   F    V+ ++   SD+ 
Sbjct: 128 DDCGLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHY 187

Query: 133 SLFINL---NHVESSPP--KPFRFFSLWSDDPTCRNIIENA 26
           ++ I+L   NH +   P  + FRF + W      R ++EN+
Sbjct: 188 AISIDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENS 228


>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/87 (36%), Positives = 46/87 (52%)
 Frame = -2

Query: 313  NDLGLFDLGSKGPRFTWSNRRSFNSHILERLDRTVANTSWVSLFLMVSVKTLVNAISDYL 134
            N+LGL D+G  GP +TWSN++     +LERLDR +AN  W   +   +V  L    SD+ 
Sbjct: 937  NNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHA 996

Query: 133  SLFINLNHVESSPPKPFRFFSLWSDDP 53
             +   LN     P + F F + W  +P
Sbjct: 997  PIIAILNPKNRRPKRSFMFENWWLLEP 1023