BLASTX nr result
ID: Coptis23_contig00028624
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028624 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317403.1| predicted protein [Populus trichocarpa] gi|2... 169 2e-40 gb|ACD56664.1| putative leucine-rich repeat transmembrane protei... 167 8e-40 gb|AAT64017.1| putative leucine-rich repeat transmembrane protei... 167 8e-40 gb|AAT64032.1| putative leucine-rich repeat transmembrane protei... 166 2e-39 ref|XP_002305735.1| predicted protein [Populus trichocarpa] gi|2... 165 4e-39 >ref|XP_002317403.1| predicted protein [Populus trichocarpa] gi|222860468|gb|EEE98015.1| predicted protein [Populus trichocarpa] Length = 617 Score = 169 bits (429), Expect = 2e-40 Identities = 87/104 (83%), Positives = 95/104 (91%) Frame = -1 Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133 GFVISL+MAS+GL G LSPSIGNL HLRTMLLQNN++SGP+P EIGKLSEL+TLDLSGNQ Sbjct: 73 GFVISLEMASVGLSGTLSPSIGNLIHLRTMLLQNNHLSGPIPEEIGKLSELQTLDLSGNQ 132 Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1 F G IPSSLGFLT LSYLRL+KN LSGQIPR VA+LTGLSFLDL Sbjct: 133 FGGGIPSSLGFLTHLSYLRLSKNNLSGQIPRLVASLTGLSFLDL 176 >gb|ACD56664.1| putative leucine-rich repeat transmembrane protein [Gossypium arboreum] Length = 618 Score = 167 bits (423), Expect = 8e-40 Identities = 86/104 (82%), Positives = 92/104 (88%) Frame = -1 Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133 GFVISL+MAS GL GMLSPSIGNL HLRTMLLQNN +SGP+P EIGKLSEL+TLDLSGN Sbjct: 77 GFVISLEMASTGLSGMLSPSIGNLSHLRTMLLQNNQLSGPIPDEIGKLSELQTLDLSGNH 136 Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1 FVG IPS+LG LT LSYLRL+KN LSG IPR VANLTGLSFLDL Sbjct: 137 FVGAIPSTLGSLTHLSYLRLSKNNLSGPIPRHVANLTGLSFLDL 180 >gb|AAT64017.1| putative leucine-rich repeat transmembrane protein [Gossypium hirsutum] Length = 618 Score = 167 bits (423), Expect = 8e-40 Identities = 86/104 (82%), Positives = 92/104 (88%) Frame = -1 Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133 GFVISL+MAS GL GMLSPSIGNL HLRTMLLQNN +SGP+P EIGKLSEL+TLDLSGN Sbjct: 77 GFVISLEMASTGLSGMLSPSIGNLSHLRTMLLQNNQLSGPIPDEIGKLSELQTLDLSGNH 136 Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1 FVG IPS+LG LT LSYLRL+KN LSG IPR VANLTGLSFLDL Sbjct: 137 FVGAIPSTLGSLTHLSYLRLSKNNLSGPIPRHVANLTGLSFLDL 180 >gb|AAT64032.1| putative leucine-rich repeat transmembrane protein [Gossypium hirsutum] Length = 618 Score = 166 bits (420), Expect = 2e-39 Identities = 85/104 (81%), Positives = 92/104 (88%) Frame = -1 Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133 GFVISL+MAS GL G+LSPSIGNL HLRTMLLQNN +SGP+P EIGKLSEL+TLDLSGN Sbjct: 77 GFVISLEMASTGLSGLLSPSIGNLSHLRTMLLQNNQLSGPIPDEIGKLSELQTLDLSGNH 136 Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1 FVG IPS+LG LT LSYLRL+KN LSG IPR VANLTGLSFLDL Sbjct: 137 FVGAIPSTLGSLTHLSYLRLSKNNLSGPIPRHVANLTGLSFLDL 180 >ref|XP_002305735.1| predicted protein [Populus trichocarpa] gi|222848699|gb|EEE86246.1| predicted protein [Populus trichocarpa] Length = 616 Score = 165 bits (417), Expect = 4e-39 Identities = 84/104 (80%), Positives = 93/104 (89%) Frame = -1 Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133 GFV SL+MAS L G LSPSI NL HLRTMLLQNN++SGP+P EIGKLS+L+TLDLSGNQ Sbjct: 73 GFVFSLEMASARLSGTLSPSIANLSHLRTMLLQNNHLSGPIPEEIGKLSDLQTLDLSGNQ 132 Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1 FVG IPSSLGFLT LSYLRL+KN+L+GQIPR VANLTGLSFLDL Sbjct: 133 FVGGIPSSLGFLTHLSYLRLSKNKLTGQIPRLVANLTGLSFLDL 176