BLASTX nr result

ID: Coptis23_contig00028624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028624
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317403.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
gb|ACD56664.1| putative leucine-rich repeat transmembrane protei...   167   8e-40
gb|AAT64017.1| putative leucine-rich repeat transmembrane protei...   167   8e-40
gb|AAT64032.1| putative leucine-rich repeat transmembrane protei...   166   2e-39
ref|XP_002305735.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39

>ref|XP_002317403.1| predicted protein [Populus trichocarpa] gi|222860468|gb|EEE98015.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  169 bits (429), Expect = 2e-40
 Identities = 87/104 (83%), Positives = 95/104 (91%)
 Frame = -1

Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133
           GFVISL+MAS+GL G LSPSIGNL HLRTMLLQNN++SGP+P EIGKLSEL+TLDLSGNQ
Sbjct: 73  GFVISLEMASVGLSGTLSPSIGNLIHLRTMLLQNNHLSGPIPEEIGKLSELQTLDLSGNQ 132

Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1
           F G IPSSLGFLT LSYLRL+KN LSGQIPR VA+LTGLSFLDL
Sbjct: 133 FGGGIPSSLGFLTHLSYLRLSKNNLSGQIPRLVASLTGLSFLDL 176


>gb|ACD56664.1| putative leucine-rich repeat transmembrane protein [Gossypium
           arboreum]
          Length = 618

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/104 (82%), Positives = 92/104 (88%)
 Frame = -1

Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133
           GFVISL+MAS GL GMLSPSIGNL HLRTMLLQNN +SGP+P EIGKLSEL+TLDLSGN 
Sbjct: 77  GFVISLEMASTGLSGMLSPSIGNLSHLRTMLLQNNQLSGPIPDEIGKLSELQTLDLSGNH 136

Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1
           FVG IPS+LG LT LSYLRL+KN LSG IPR VANLTGLSFLDL
Sbjct: 137 FVGAIPSTLGSLTHLSYLRLSKNNLSGPIPRHVANLTGLSFLDL 180


>gb|AAT64017.1| putative leucine-rich repeat transmembrane protein [Gossypium
           hirsutum]
          Length = 618

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/104 (82%), Positives = 92/104 (88%)
 Frame = -1

Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133
           GFVISL+MAS GL GMLSPSIGNL HLRTMLLQNN +SGP+P EIGKLSEL+TLDLSGN 
Sbjct: 77  GFVISLEMASTGLSGMLSPSIGNLSHLRTMLLQNNQLSGPIPDEIGKLSELQTLDLSGNH 136

Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1
           FVG IPS+LG LT LSYLRL+KN LSG IPR VANLTGLSFLDL
Sbjct: 137 FVGAIPSTLGSLTHLSYLRLSKNNLSGPIPRHVANLTGLSFLDL 180


>gb|AAT64032.1| putative leucine-rich repeat transmembrane protein [Gossypium
           hirsutum]
          Length = 618

 Score =  166 bits (420), Expect = 2e-39
 Identities = 85/104 (81%), Positives = 92/104 (88%)
 Frame = -1

Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133
           GFVISL+MAS GL G+LSPSIGNL HLRTMLLQNN +SGP+P EIGKLSEL+TLDLSGN 
Sbjct: 77  GFVISLEMASTGLSGLLSPSIGNLSHLRTMLLQNNQLSGPIPDEIGKLSELQTLDLSGNH 136

Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1
           FVG IPS+LG LT LSYLRL+KN LSG IPR VANLTGLSFLDL
Sbjct: 137 FVGAIPSTLGSLTHLSYLRLSKNNLSGPIPRHVANLTGLSFLDL 180


>ref|XP_002305735.1| predicted protein [Populus trichocarpa] gi|222848699|gb|EEE86246.1|
           predicted protein [Populus trichocarpa]
          Length = 616

 Score =  165 bits (417), Expect = 4e-39
 Identities = 84/104 (80%), Positives = 93/104 (89%)
 Frame = -1

Query: 312 GFVISLDMASIGLFGMLSPSIGNLPHLRTMLLQNNYISGPVPPEIGKLSELRTLDLSGNQ 133
           GFV SL+MAS  L G LSPSI NL HLRTMLLQNN++SGP+P EIGKLS+L+TLDLSGNQ
Sbjct: 73  GFVFSLEMASARLSGTLSPSIANLSHLRTMLLQNNHLSGPIPEEIGKLSDLQTLDLSGNQ 132

Query: 132 FVGEIPSSLGFLTRLSYLRLNKNRLSGQIPRGVANLTGLSFLDL 1
           FVG IPSSLGFLT LSYLRL+KN+L+GQIPR VANLTGLSFLDL
Sbjct: 133 FVGGIPSSLGFLTHLSYLRLSKNKLTGQIPRLVANLTGLSFLDL 176


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