BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028615
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]   107   3e-32
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   107   1e-31
ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arab...   102   9e-30
emb|CAB61996.1| putative protein [Arabidopsis thaliana]               100   3e-29
ref|NP_001190038.1| tetratricopeptide repeat-like family protein...   100   4e-29

>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  107 bits (268), Expect(2) = 3e-32
 Identities = 50/64 (78%), Positives = 58/64 (90%)
 Frame = -2

Query: 276  ISQMTVKPSERVWGALLSACRVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRW 97
            I QM ++P+ERVWGALLSACRVYSNM +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW
Sbjct: 1455 IKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRW 1514

Query: 96   KERT 85
            ++ T
Sbjct: 1515 EDVT 1518



 Score = 55.8 bits (133), Expect(2) = 3e-32
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = -1

Query: 94   RAHTFLVGDQSHPQTKEIYVELDVLVSKMKE 2
            R HTFL GDQSHPQ+K+IY ELDVLV KMKE
Sbjct: 1543 RVHTFLAGDQSHPQSKQIYEELDVLVGKMKE 1573


>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  107 bits (268), Expect(2) = 1e-31
 Identities = 50/64 (78%), Positives = 58/64 (90%)
 Frame = -2

Query: 276 ISQMTVKPSERVWGALLSACRVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRW 97
           I QM ++P+ERVWGALLSACRVYSNM +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW
Sbjct: 466 IKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRW 525

Query: 96  KERT 85
           ++ T
Sbjct: 526 EDVT 529



 Score = 53.5 bits (127), Expect(2) = 1e-31
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -1

Query: 94  RAHTFLVGDQSHPQTKEIYVELDVLVSKMKE 2
           R HTFL GDQSHPQ+K+IY ELDV V KMKE
Sbjct: 554 RVHTFLAGDQSHPQSKQIYEELDVSVGKMKE 584


>ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata] gi|297323489|gb|EFH53910.1| hypothetical protein
           ARALYDRAFT_485272 [Arabidopsis lyrata subsp. lyrata]
          Length = 1217

 Score =  102 bits (255), Expect(2) = 9e-30
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -2

Query: 276 ISQMTVKPSERVWGALLSACRVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRW 97
           I +M ++P+ERVWGALL ACRV+SN  +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW
Sbjct: 470 IQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 529

Query: 96  KERT 85
           +E T
Sbjct: 530 EEVT 533



 Score = 52.4 bits (124), Expect(2) = 9e-30
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = -1

Query: 88  HTFLVGDQSHPQTKEIYVELDVLVSKMKE 2
           HTFLVGD+SHPQ+ EIY ELDVLV KMKE
Sbjct: 560 HTFLVGDRSHPQSAEIYRELDVLVKKMKE 588


>emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  100 bits (250), Expect(2) = 3e-29
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = -2

Query: 276 ISQMTVKPSERVWGALLSACRVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRW 97
           I  M+++P+ERVWGALL ACRV+S+  +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528

Query: 96  KERT 85
           +E T
Sbjct: 529 EEVT 532



 Score = 52.4 bits (124), Expect(2) = 3e-29
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = -1

Query: 88  HTFLVGDQSHPQTKEIYVELDVLVSKMKE 2
           HTFLVGD+SHPQ+ EIY ELDVLV KMKE
Sbjct: 559 HTFLVGDRSHPQSDEIYRELDVLVKKMKE 587


>ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
           gi|218546754|sp|P0C899.1|PP271_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g49142 gi|332644983|gb|AEE78504.1|
           tetratricopeptide repeat-like family protein
           [Arabidopsis thaliana]
          Length = 686

 Score =  100 bits (250), Expect(2) = 4e-29
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = -2

Query: 276 ISQMTVKPSERVWGALLSACRVYSNMSLGLVAADHLFQLVPEQAGYYVLLSNIYAKAGRW 97
           I  M+++P+ERVWGALL ACRV+S+  +GL+AAD LFQL PEQ+GYYVLLSNIYAKAGRW
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528

Query: 96  KERT 85
           +E T
Sbjct: 529 EEVT 532



 Score = 52.4 bits (124), Expect(2) = 4e-29
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = -1

Query: 88  HTFLVGDQSHPQTKEIYVELDVLVSKMKE 2
           HTFLVGD+SHPQ+ EIY ELDVLV KMKE
Sbjct: 559 HTFLVGDRSHPQSDEIYRELDVLVKKMKE 587