BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028607
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34329.1| Integrase core domain containing protein [Solanum...   311   9e-83
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]               307   2e-81
emb|CAN71185.1| hypothetical protein VITISV_014270 [Vitis vinifera]   300   3e-79
gb|AAT38747.2| Polyprotein, putative [Solanum demissum]               297   2e-78
emb|CAN60609.1| hypothetical protein VITISV_036599 [Vitis vinifera]   296   5e-78

>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  311 bits (798), Expect = 9e-83
 Identities = 152/285 (53%), Positives = 198/285 (69%), Gaps = 2/285 (0%)
 Frame = -3

Query: 849  DLKTKQTIGGGYEQSGLYYFQN*NNSALAAI--SPLQWHRRLGHLLLNKLRSLVPSISSS 676
            D  T Q IG G+E  GLYY  + N+ A  +I  SP   H+RLGH  L+KL+ +VPS+SS 
Sbjct: 451  DRSTGQMIGTGHESQGLYYLTSSNSLAACSITDSPDLIHKRLGHSSLSKLQKMVPSLSSL 510

Query: 675  VHLECEVCELAKHRRATYKPRVESCSSSHFHLVHSNIWGPCRTVGLFDAKYFVTFIDDFS 496
              L+CE C+L KH RAT+    E  S S F LVHS+IWGP R       +YFV+FIDD+S
Sbjct: 511  STLDCESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLGFRYFVSFIDDYS 570

Query: 495  RMCWVYILKDRSELFTTFKSFYFEIVNQYSASLHILRSDNAREYTAGPFRSFLNDNGILH 316
            +  WV+++KDRSELF+ FKSF+ EI NQ+  S+   RSDNA EY +  FR F+   GI+H
Sbjct: 571  KCTWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFREFMTHQGIIH 630

Query: 315  QTSYVDTPQQNGVAKRKNRPLLEVARCLMFQMNVPKFYWAEAILTACFLINRMPSSVLHG 136
            QT+   TPQQNGVA+RKNR L+E AR L+ + NVP  +W +A+LT+C+LINRMPSS +  
Sbjct: 631  QTTCPYTPQQNGVAERKNRHLIETARTLLLESNVPLRFWGDAVLTSCYLINRMPSSSIQN 690

Query: 135  *SLISVLFPNQIVFPLPPKVFGSICFVHNLQVGRDKLDPRAIKCI 1
                S+LFP   ++P+PP+VFGS CFVHNL  G+DKL PRA+KC+
Sbjct: 691  QVPHSILFPQSHLYPIPPRVFGSTCFVHNLAPGKDKLAPRALKCV 735


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score =  307 bits (787), Expect = 2e-81
 Identities = 150/285 (52%), Positives = 198/285 (69%), Gaps = 2/285 (0%)
 Frame = -3

Query: 849  DLKTKQTIGGGYEQSGLYYFQN*NNSALAAI--SPLQWHRRLGHLLLNKLRSLVPSISSS 676
            D  T Q IG G+E  GLYY  + N+    +I  SP   H+RLGH  L+KL+ +VPS+SS 
Sbjct: 212  DRNTGQMIGTGHESQGLYYLTSSNSLTACSITDSPDLIHKRLGHPSLSKLQKMVPSLSSL 271

Query: 675  VHLECEVCELAKHRRATYKPRVESCSSSHFHLVHSNIWGPCRTVGLFDAKYFVTFIDDFS 496
              L+CE C+L KH RAT+    E  S S F LVHS+IWGP R       +YFV+FIDD+S
Sbjct: 272  STLDCESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLGFRYFVSFIDDYS 331

Query: 495  RMCWVYILKDRSELFTTFKSFYFEIVNQYSASLHILRSDNAREYTAGPFRSFLNDNGILH 316
            R  WV+++KDRSELF+ FKSF+ EI NQ+  S+   RSDNA EY +  F+ F++  GI+H
Sbjct: 332  RCTWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFQEFMSHQGIIH 391

Query: 315  QTSYVDTPQQNGVAKRKNRPLLEVARCLMFQMNVPKFYWAEAILTACFLINRMPSSVLHG 136
            QTS   TPQQNGVA+RKNR L+E AR L+ + +VP  +W +A+L++C+LINRMPSS +  
Sbjct: 392  QTSCPYTPQQNGVAERKNRHLIETARTLLIESHVPLRFWGDAVLSSCYLINRMPSSSIQN 451

Query: 135  *SLISVLFPNQIVFPLPPKVFGSICFVHNLQVGRDKLDPRAIKCI 1
                S+LFP   ++P+PP+VFGS CFVHNL  G+DKL PRA+KC+
Sbjct: 452  QVPHSILFPQSHLYPIPPRVFGSTCFVHNLAPGKDKLAPRALKCV 496


>emb|CAN71185.1| hypothetical protein VITISV_014270 [Vitis vinifera]
          Length = 1024

 Score =  300 bits (768), Expect = 3e-79
 Identities = 144/285 (50%), Positives = 202/285 (70%), Gaps = 2/285 (0%)
 Frame = -3

Query: 849 DLKTKQTIGGGYEQSGLYYFQN*NNSA--LAAISPLQWHRRLGHLLLNKLRSLVPSISSS 676
           D  T +TIG G E  GLY+  + +++A  ++  +PL  H RLGH  L+K + +VP  S+ 
Sbjct: 139 DRSTGKTIGIGRESQGLYHLTSDSSAAVCISTDAPLLIHNRLGHPSLSKFQKMVPRFSTL 198

Query: 675 VHLECEVCELAKHRRATYKPRVESCSSSHFHLVHSNIWGPCRTVGLFDAKYFVTFIDDFS 496
             L CE C+L KH R ++  R+ + + S F LVH+++WGPCRT      +YFVTFIDD+S
Sbjct: 199 SSLPCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCRTASTLGFQYFVTFIDDYS 258

Query: 495 RMCWVYILKDRSELFTTFKSFYFEIVNQYSASLHILRSDNAREYTAGPFRSFLNDNGILH 316
           R  W++++K+R+ELF+ F+ FY EI  Q++ S+ +LRSDNAREY + PF SF++ +GILH
Sbjct: 259 RCTWLFLMKNRAELFSIFQKFYXEIQTQFNISIRVLRSDNAREYFSAPFTSFMSHHGILH 318

Query: 315 QTSYVDTPQQNGVAKRKNRPLLEVARCLMFQMNVPKFYWAEAILTACFLINRMPSSVLHG 136
           Q+S   TPQQNGVA+RKNR L+E AR ++   NVP  +W +A+LTAC+LINRMPSSVLH 
Sbjct: 319 QSSCAHTPQQNGVAERKNRHLVETARTILLHGNVPFRFWGDAVLTACYLINRMPSSVLHD 378

Query: 135 *SLISVLFPNQIVFPLPPKVFGSICFVHNLQVGRDKLDPRAIKCI 1
               S+LFP+Q ++ LPP+VFG  CFVH L  G+DKL  +A+KC+
Sbjct: 379 QIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCL 423


>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score =  297 bits (761), Expect = 2e-78
 Identities = 147/286 (51%), Positives = 195/286 (68%), Gaps = 3/286 (1%)
 Frame = -3

Query: 849  DLKTKQTIGGGYEQSGLYYFQN*NNSALAA---ISPLQWHRRLGHLLLNKLRSLVPSISS 679
            DL TKQ IG  +   GLY        ++A    +SP + H RLGH  L  L+ L P   +
Sbjct: 456  DLMTKQIIGKRHVSDGLYILDEWTPPSVACSSIVSPFEAHCRLGHPSLPVLKKLCPQFHN 515

Query: 678  SVHLECEVCELAKHRRATYKPRVESCSSSHFHLVHSNIWGPCRTVGLFDAKYFVTFIDDF 499
               ++CE C  AKH R +  PR    ++  F LVHS++WGPC  V     +YFVTF+DDF
Sbjct: 516  VPSIDCESCHFAKHHRISLSPRNNKRANFAFELVHSDVWGPCPVVSKVGFRYFVTFMDDF 575

Query: 498  SRMCWVYILKDRSELFTTFKSFYFEIVNQYSASLHILRSDNAREYTAGPFRSFLNDNGIL 319
            SRM W+Y +K+RSE+F+ F +F  EI  Q++AS+HILRSDNARE+ +  F++++N  GIL
Sbjct: 576  SRMTWIYFMKNRSEVFSHFSNFCAEIKTQFNASVHILRSDNAREFMSASFQNYMNQYGIL 635

Query: 318  HQTSYVDTPQQNGVAKRKNRPLLEVARCLMFQMNVPKFYWAEAILTACFLINRMPSSVLH 139
            HQ+S VDTP QNGVA+RKNR LLE AR L+FQM VPK +WA+ + TA FLINRMPS+VL+
Sbjct: 636  HQSSCVDTPSQNGVAERKNRHLLETARVLLFQMKVPKQFWADTVSTASFLINRMPSTVLN 695

Query: 138  G*SLISVLFPNQIVFPLPPKVFGSICFVHNLQVGRDKLDPRAIKCI 1
            G     VLFPN+ +FPL PKVFGS C+V +++    KLDP+A+KC+
Sbjct: 696  GDIPYGVLFPNKPLFPLEPKVFGSTCYVRDVRPHITKLDPKALKCV 741


>emb|CAN60609.1| hypothetical protein VITISV_036599 [Vitis vinifera]
          Length = 1455

 Score =  296 bits (757), Expect = 5e-78
 Identities = 143/285 (50%), Positives = 200/285 (70%), Gaps = 2/285 (0%)
 Frame = -3

Query: 849  DLKTKQTIGGGYEQSGLYYFQN*NNSA--LAAISPLQWHRRLGHLLLNKLRSLVPSISSS 676
            D  T +TIG G E  GLY+  + ++ A  ++  +PL  H RLGH  L+K + +VP  S+ 
Sbjct: 548  DXSTGKTIGIGRESQGLYHLTSDSSPAVCISTDAPLLIHNRLGHPSLSKFQKMVPRFSTL 607

Query: 675  VHLECEVCELAKHRRATYKPRVESCSSSHFHLVHSNIWGPCRTVGLFDAKYFVTFIDDFS 496
              L CE C+L KH R ++  R+ + + S F LVH+++WGPCRT      +YFVTFIDD+S
Sbjct: 608  SSLPCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCRTASTLGFQYFVTFIDDYS 667

Query: 495  RMCWVYILKDRSELFTTFKSFYFEIVNQYSASLHILRSDNAREYTAGPFRSFLNDNGILH 316
            R  W++++K+R+ELF+ F+ FY EI  Q++ S+ +LRSDNAREY +  F SF++ +GILH
Sbjct: 668  RCTWLFLMKNRAELFSIFQKFYTEIQTQFNISIRVLRSDNAREYFSAQFTSFMSHHGILH 727

Query: 315  QTSYVDTPQQNGVAKRKNRPLLEVARCLMFQMNVPKFYWAEAILTACFLINRMPSSVLHG 136
            Q+S   TPQQNGVA+RKNR L+E AR L+   +VP  +W +A+LTAC+LINRMPSSVLH 
Sbjct: 728  QSSCAHTPQQNGVAERKNRHLVETARTLLLHSHVPFRFWGDAVLTACYLINRMPSSVLHD 787

Query: 135  *SLISVLFPNQIVFPLPPKVFGSICFVHNLQVGRDKLDPRAIKCI 1
                S+LFP+Q ++ LPP+VFG  CFVH L  G+DKL  +A+KC+
Sbjct: 788  QIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCL 832