BLASTX nr result

ID: Coptis23_contig00028595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028595
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533655.1| ATP binding protein, putative [Ricinus commu...   214   6e-54
ref|XP_004170954.1| PREDICTED: LOW QUALITY PROTEIN: probable met...   211   4e-53
ref|XP_004149997.1| PREDICTED: probable methyltransferase PMT27-...   211   4e-53
ref|XP_002310282.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_002327776.1| predicted protein [Populus trichocarpa] gi|2...   208   4e-52

>ref|XP_002533655.1| ATP binding protein, putative [Ricinus communis]
           gi|223526450|gb|EEF28726.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 961

 Score =  214 bits (545), Expect = 6e-54
 Identities = 92/105 (87%), Positives = 100/105 (95%)
 Frame = -1

Query: 317 ERHCPDEGPSCLVPVPDGYKRSIEWPTSRDKIWYHNIPHTKLAEVKGHQNWVKVTGEFLT 138
           ERHCP+EGP+CLVP+PDGYKR I WP SRDKIWYHN+PHTKLAEVKGHQNWVKVTGEFLT
Sbjct: 468 ERHCPEEGPTCLVPLPDGYKRPIAWPASRDKIWYHNVPHTKLAEVKGHQNWVKVTGEFLT 527

Query: 137 FPGGGTQFIHGALHYIDFLQKALPKIAWGKHTRVVLDVGCGVASF 3
           FPGGGTQFIHGALHYIDF+Q+A+P IAWGK TRV+LDVGCGVASF
Sbjct: 528 FPGGGTQFIHGALHYIDFVQQAVPNIAWGKRTRVILDVGCGVASF 572


>ref|XP_004170954.1| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase
           PMT27-like, partial [Cucumis sativus]
          Length = 611

 Score =  211 bits (538), Expect = 4e-53
 Identities = 91/105 (86%), Positives = 101/105 (96%)
 Frame = -1

Query: 317 ERHCPDEGPSCLVPVPDGYKRSIEWPTSRDKIWYHNIPHTKLAEVKGHQNWVKVTGEFLT 138
           ERHCP+EGP+CLV +P+GYKRSIEWP SRDKIWYHN+PHTKLAEVKGHQNWVKVTGEFLT
Sbjct: 435 ERHCPEEGPTCLVSLPEGYKRSIEWPRSRDKIWYHNVPHTKLAEVKGHQNWVKVTGEFLT 494

Query: 137 FPGGGTQFIHGALHYIDFLQKALPKIAWGKHTRVVLDVGCGVASF 3
           FPGGGTQFIHGALHYI+FLQ+++P IAWGK TRV+LDVGCGVASF
Sbjct: 495 FPGGGTQFIHGALHYIEFLQQSVPDIAWGKRTRVILDVGCGVASF 539


>ref|XP_004149997.1| PREDICTED: probable methyltransferase PMT27-like [Cucumis sativus]
          Length = 882

 Score =  211 bits (538), Expect = 4e-53
 Identities = 91/105 (86%), Positives = 101/105 (96%)
 Frame = -1

Query: 317 ERHCPDEGPSCLVPVPDGYKRSIEWPTSRDKIWYHNIPHTKLAEVKGHQNWVKVTGEFLT 138
           ERHCP+EGP+CLV +P+GYKRSIEWP SRDKIWYHN+PHTKLAEVKGHQNWVKVTGEFLT
Sbjct: 389 ERHCPEEGPTCLVSLPEGYKRSIEWPRSRDKIWYHNVPHTKLAEVKGHQNWVKVTGEFLT 448

Query: 137 FPGGGTQFIHGALHYIDFLQKALPKIAWGKHTRVVLDVGCGVASF 3
           FPGGGTQFIHGALHYI+FLQ+++P IAWGK TRV+LDVGCGVASF
Sbjct: 449 FPGGGTQFIHGALHYIEFLQQSVPDIAWGKRTRVILDVGCGVASF 493


>ref|XP_002310282.1| predicted protein [Populus trichocarpa] gi|222853185|gb|EEE90732.1|
           predicted protein [Populus trichocarpa]
          Length = 847

 Score =  209 bits (532), Expect = 2e-52
 Identities = 90/105 (85%), Positives = 98/105 (93%)
 Frame = -1

Query: 317 ERHCPDEGPSCLVPVPDGYKRSIEWPTSRDKIWYHNIPHTKLAEVKGHQNWVKVTGEFLT 138
           ERHCP+ GP+CLVP+P GYKR I WP SRDKIWYHN+PH KLAEVKGHQNWVKVTGEFLT
Sbjct: 354 ERHCPELGPTCLVPLPQGYKRPITWPQSRDKIWYHNVPHPKLAEVKGHQNWVKVTGEFLT 413

Query: 137 FPGGGTQFIHGALHYIDFLQKALPKIAWGKHTRVVLDVGCGVASF 3
           FPGGGTQFIHGALHYIDF+Q+A+PKI WGKHTRV+LDVGCGVASF
Sbjct: 414 FPGGGTQFIHGALHYIDFVQQAVPKIKWGKHTRVILDVGCGVASF 458


>ref|XP_002327776.1| predicted protein [Populus trichocarpa] gi|222836861|gb|EEE75254.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score =  208 bits (529), Expect = 4e-52
 Identities = 89/105 (84%), Positives = 98/105 (93%)
 Frame = -1

Query: 317 ERHCPDEGPSCLVPVPDGYKRSIEWPTSRDKIWYHNIPHTKLAEVKGHQNWVKVTGEFLT 138
           ERHCP+ GP+CLVP  +GYKR I WP SRDKIWYHN+PHTKLAEVKGHQNW+KVTGEFLT
Sbjct: 456 ERHCPEVGPTCLVPPSEGYKRPITWPQSRDKIWYHNVPHTKLAEVKGHQNWIKVTGEFLT 515

Query: 137 FPGGGTQFIHGALHYIDFLQKALPKIAWGKHTRVVLDVGCGVASF 3
           FPGGGTQFIHGALHYIDF+Q+A+PKI WGKHTRV+LDVGCGVASF
Sbjct: 516 FPGGGTQFIHGALHYIDFVQQAVPKIKWGKHTRVILDVGCGVASF 560


Top