BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028590
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    81   1e-13
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    81   1e-13
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    65   4e-09
ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis ...    65   4e-09

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
 Frame = +2

Query: 17  PTWSKVMSLGDRMLFLGQGESFSFSSRDLPGSWKGNHIYFTDDHVLLGNPKYQKAAG-SD 193
           P W  V SLGDR LFLG+  S S SS D PG  KGN IY+TDD+       Y    G  D
Sbjct: 300 PRWEVVSSLGDRALFLGENLSLSLSSVDFPGC-KGNCIYYTDDY---SEDNYDGIGGEQD 355

Query: 194 YGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 310
            G+FNLED   +    PLP  +   R   WPPP+W+ PN
Sbjct: 356 LGIFNLEDGSIE----PLPCSHFRIR---WPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
 Frame = +2

Query: 17  PTWSKVMSLGDRMLFLGQGESFSFSSRDLPGSWKGNHIYFTDDHVLLGNPKYQKAAG-SD 193
           P W  V SLGDR LFLG+  S S SS D PG  KGN IY+TDD+       Y    G  D
Sbjct: 300 PRWEVVSSLGDRALFLGENLSLSLSSVDFPGC-KGNCIYYTDDY---SEDNYDGIGGEQD 355

Query: 194 YGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 310
            G+FNLED   +    PLP  +   R   WPPP+W+ PN
Sbjct: 356 LGIFNLEDGSIE----PLPCSHFRIR---WPPPLWVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = +2

Query: 17  PTWSKVMSLGDRMLFLGQGESFSFSSRDLPGSWKGNHIYFTDDHVLLGNPKYQKAAGS-D 193
           P W +V SLGD MLF+G+  S + S+  L G   G+ IY+TDD+       Y    G  D
Sbjct: 300 PRWERVTSLGDMMLFIGENSSLALSASGLSGC-MGDCIYYTDDY---SANNYDGHIGEHD 355

Query: 194 YGVFNLEDECFQTLPLPLPAEYKGRRTRI-WPPPIWILPN 310
            G+F L D   +    PLP   +   +R+ WPPP+WI PN
Sbjct: 356 LGIFKLSDGSIE----PLPCYPRNSYSRLQWPPPLWISPN 391


>ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
           gi|449485151|ref|XP_004157083.1| PREDICTED: F-box
           protein SKIP23-like [Cucumis sativus]
          Length = 392

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = +2

Query: 17  PTWSKVMSLGDRMLFLGQGESFSFSSRDLPGSWKGNHIYFTDDHVLLGNPKYQKAAGS-D 193
           P W KV +L +  LF+G   S +FS+ D  G   GN IY+TDD+    +  YQ+     D
Sbjct: 299 PRWEKVENLNEMALFVGGNSSMAFSAADF-GEISGNCIYYTDDY---SDSDYQEQGEEPD 354

Query: 194 YGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 310
            G+F L DE F+ LP      +  RR     PPIW+ PN
Sbjct: 355 MGIFRLCDESFEPLPYYSGGSHSRRRLL---PPIWVTPN 390


>ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 405

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/95 (40%), Positives = 51/95 (53%)
 Frame = +2

Query: 23  WSKVMSLGDRMLFLGQGESFSFSSRDLPGSWKGNHIYFTDDHVLLGNPKYQKAAGSDYGV 202
           W  V  +GDR+LF+G   +FS SS D PG +KGN +YFT D       +     G D G+
Sbjct: 317 WDWVSDIGDRVLFVGDDRTFSLSSTDFPG-FKGNCVYFTQDCFC---EEDDDRPGFDAGI 372

Query: 203 FNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILP 307
           F+LE+     +  PL A + G     WPPP W+ P
Sbjct: 373 FDLEER----IAGPLSA-FPGYSKIFWPPPAWLRP 402