BLASTX nr result

ID: Coptis23_contig00028573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028573
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263...   110   2e-22
emb|CBI40485.3| unnamed protein product [Vitis vinifera]              110   2e-22
emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera]   109   2e-22
emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]   109   3e-22
ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265...   108   3e-22

>ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera]
          Length = 450

 Score =  110 bits (274), Expect = 2e-22
 Identities = 44/56 (78%), Positives = 47/56 (83%)
 Frame = +3

Query: 66  KCDIFNGSWIRNPSGPIYTNESCTVIQQHQNCMTNGRPDSGYLYWRWKPWDCELPR 233
           KCDIF G WI +PSGP+YTNESC  I+ HQNCM NGRPDSGYLYWRW P DCELPR
Sbjct: 101 KCDIFTGDWIPDPSGPVYTNESCHAIENHQNCMRNGRPDSGYLYWRWNPRDCELPR 156


>emb|CBI40485.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  110 bits (274), Expect = 2e-22
 Identities = 44/56 (78%), Positives = 47/56 (83%)
 Frame = +3

Query: 66  KCDIFNGSWIRNPSGPIYTNESCTVIQQHQNCMTNGRPDSGYLYWRWKPWDCELPR 233
           KCDIF G WI +PSGP+YTNESC  I+ HQNCM NGRPDSGYLYWRW P DCELPR
Sbjct: 71  KCDIFTGDWIPDPSGPVYTNESCHAIENHQNCMRNGRPDSGYLYWRWNPRDCELPR 126


>emb|CAN76813.1| hypothetical protein VITISV_044114 [Vitis vinifera]
          Length = 486

 Score =  109 bits (273), Expect = 2e-22
 Identities = 44/56 (78%), Positives = 47/56 (83%)
 Frame = +3

Query: 66  KCDIFNGSWIRNPSGPIYTNESCTVIQQHQNCMTNGRPDSGYLYWRWKPWDCELPR 233
           KCDIF G WI +PSGP+YTNESC  I+ HQNCM NGRPDSGYLYWRW P DCELPR
Sbjct: 138 KCDIFTGDWIPDPSGPVYTNESCHXIENHQNCMRNGRPDSGYLYWRWNPRDCELPR 193


>emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]
          Length = 420

 Score =  109 bits (272), Expect = 3e-22
 Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
 Frame = +3

Query: 24  NEVLPQIVVETPQG-KCDIFNGSWIRNPSGPIYTNESCTVIQQHQNCMTNGRPDSGYLYW 200
           +E +P+I    P+  KCD+F G WI NPSGP+YTNESC +I+ HQNCM NGRPDS YLYW
Sbjct: 57  SEDVPEIRDPIPEKEKCDLFTGDWIPNPSGPVYTNESCQLIETHQNCMKNGRPDSAYLYW 116

Query: 201 RWKPWDCELPR 233
           RW P DCELP+
Sbjct: 117 RWSPRDCELPQ 127


>ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265666 [Vitis vinifera]
           gi|297742310|emb|CBI34459.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  108 bits (271), Expect = 3e-22
 Identities = 46/76 (60%), Positives = 56/76 (73%)
 Frame = +3

Query: 6   DGVEQDNEVLPQIVVETPQGKCDIFNGSWIRNPSGPIYTNESCTVIQQHQNCMTNGRPDS 185
           + V +  + +P+ VV     KCD+F G WI NPSGP+YTNESC +I+ HQNCM NGRPDS
Sbjct: 62  EDVPEIRDPIPEKVVAE---KCDLFTGDWIPNPSGPVYTNESCQLIETHQNCMKNGRPDS 118

Query: 186 GYLYWRWKPWDCELPR 233
            YLYWRW P DCELP+
Sbjct: 119 AYLYWRWSPRDCELPQ 134


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