BLASTX nr result

ID: Coptis23_contig00028558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028558
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595911.1| hypothetical protein MTR_2g063340 [Medicago ...    63   1e-10
ref|XP_003595908.1| hypothetical protein MTR_2g063290 [Medicago ...    62   4e-08
ref|XP_003595913.1| hypothetical protein MTR_2g063360 [Medicago ...    60   1e-07
ref|XP_003604839.1| hypothetical protein MTR_4g019340 [Medicago ...    47   3e-07
gb|AFK41672.1| unknown [Medicago truncatula]                           59   3e-07

>ref|XP_003595911.1| hypothetical protein MTR_2g063340 [Medicago truncatula]
           gi|355484959|gb|AES66162.1| hypothetical protein
           MTR_2g063340 [Medicago truncatula]
          Length = 447

 Score = 63.2 bits (152), Expect(2) = 1e-10
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +1

Query: 193 YIKDWVQHEKQTIGTFGSSPTVERIAKNGILEGPKMFMVTDDLIVTPSSATAYISVLKKY 372
           YI     H+K+ I     SP        G L GP  FMVTDDL+V+P S  + ++ L++ 
Sbjct: 342 YIIHCKDHKKEVIFVDPKSPI-----SGGFLRGPTSFMVTDDLVVSPMSLISGLAYLERM 396

Query: 373 NVPISDIEERVFTIGEHEALKLLE 444
            VP++D+EERV  IG  E L +L+
Sbjct: 397 KVPLNDVEERVIRIGVKEGLSILK 420



 Score = 27.7 bits (60), Expect(2) = 1e-10
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 33  ISNLYRSVEELDDSGYIKGQCLKSKLLSPEISAKENYQIQLL 158
           + NLY S+ EL+    ++ Q +K +L  P++      + Q+L
Sbjct: 291 MDNLYNSMTELNPDRCLRSQYVKDRLCEPQVGMHLELRNQIL 332


>ref|XP_003595908.1| hypothetical protein MTR_2g063290 [Medicago truncatula]
           gi|355484956|gb|AES66159.1| hypothetical protein
           MTR_2g063290 [Medicago truncatula]
          Length = 459

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/56 (50%), Positives = 40/56 (71%)
 Frame = +1

Query: 277 GILEGPKMFMVTDDLIVTPSSATAYISVLKKYNVPISDIEERVFTIGEHEALKLLE 444
           G   GP  FMVTDDL+VTP S+ + +S L++  VP++D+EERV  IG  E L++L+
Sbjct: 377 GFSRGPLTFMVTDDLVVTPMSSISGVSYLERMKVPLNDVEERVIRIGRKEGLRILK 432


>ref|XP_003595913.1| hypothetical protein MTR_2g063360 [Medicago truncatula]
           gi|355484961|gb|AES66164.1| hypothetical protein
           MTR_2g063360 [Medicago truncatula]
          Length = 502

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = +1

Query: 277 GILEGPKMFMVTDDLIVTPSSATAYISVLKKYNVPISDIEERVFTIGEHEALKLLE 444
           G ++    +MVTDDL+VTP ++ + IS+L K  +P SD+EER+ TIG  E L +L+
Sbjct: 413 GFMKSLAFYMVTDDLVVTPCTSVSVISILSKLGIPSSDLEERIITIGNKEGLSILK 468


>ref|XP_003604839.1| hypothetical protein MTR_4g019340 [Medicago truncatula]
           gi|355505894|gb|AES87036.1| hypothetical protein
           MTR_4g019340 [Medicago truncatula]
          Length = 506

 Score = 47.4 bits (111), Expect(2) = 3e-07
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = +1

Query: 292 PKMFMVTDDLIVTPSSATAYISVLKKYNVPISDIEERVFTIGEHEALKLL 441
           P ++ V DDL V P SA + +S LK+ + P+ D+E  V +IGE EAL LL
Sbjct: 446 PALYSVGDDLKVKPFSANSCLSYLKELSFPLVDLEVNVISIGEAEALSLL 495



 Score = 32.0 bits (71), Expect(2) = 3e-07
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 3   LLNKTPLLGSISNLYRSVEELDDSGYIKGQCLKSKLLSPEISAKENYQIQLLHSTCTRPT 182
           +L+    +G + NLY+SVE LD S        +S LL+P ++       Q L+    +P 
Sbjct: 344 VLDGNSFVGCVDNLYKSVESLDSSWCTNS---RSMLLNPGVAPHFGCPNQPLNIPHVQPP 400

Query: 183 TCFIYKGLGS 212
               Y G G+
Sbjct: 401 LTTYYYGTGT 410


>gb|AFK41672.1| unknown [Medicago truncatula]
          Length = 500

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = +1

Query: 277 GILEGPKMFMVTDDLIVTPSSATAYISVLKKYNVPISDIEERVFTIGEHEALKLL 441
           G ++ P +F+V DDL VTP + T+ IS L K NVP+ D+EE + +IGE EAL LL
Sbjct: 417 GFVKRPSLFIVWDDLQVTPFANTSSISFLHKMNVPLDDLEEHIVSIGETEALNLL 471


Top