BLASTX nr result

ID: Coptis23_contig00028549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028549
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW69676.1| hypothetical protein ZEAMMB73_508622, partial [Ze...    64   2e-08
dbj|BAD62489.1| PHD zinc finger protein-like [Oryza sativa Japon...    58   9e-07
gb|EEE66405.1| hypothetical protein OsJ_22748 [Oryza sativa Japo...    58   9e-07
ref|XP_002272497.2| PREDICTED: uncharacterized protein LOC100255...    56   3e-06
emb|CBI17123.3| unnamed protein product [Vitis vinifera]               56   3e-06

>gb|AFW69676.1| hypothetical protein ZEAMMB73_508622, partial [Zea mays]
          Length = 527

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/52 (57%), Positives = 37/52 (71%)
 Frame = +3

Query: 9   KFPTKISELLETGMLKGLSVSYIFRVQQKAGLCGIIKNRGIMCSCAVCKGRK 164
           K PT + ELL TGML+G  V YI R  ++A L G+IK  GI+CSC+ CKGRK
Sbjct: 258 KIPTNLRELLATGMLEGQPVKYIMRKGKRAVLRGVIKRIGILCSCSSCKGRK 309


>dbj|BAD62489.1| PHD zinc finger protein-like [Oryza sativa Japonica Group]
          Length = 779

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +3

Query: 6   TKFPTKISELLETGMLKGLSVSYIFRVQQKAGLCGIIKNRGIMCSCAVCKGR 161
           T+ P  + +LL TG+L+G  V YI R  ++A L G+IK  GI+CSC+ CKGR
Sbjct: 154 TRIPRNLKDLLATGLLEGHPVKYIMRKGKRAVLRGVIKRVGILCSCSSCKGR 205


>gb|EEE66405.1| hypothetical protein OsJ_22748 [Oryza sativa Japonica Group]
          Length = 800

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +3

Query: 6   TKFPTKISELLETGMLKGLSVSYIFRVQQKAGLCGIIKNRGIMCSCAVCKGR 161
           T+ P  + +LL TG+L+G  V YI R  ++A L G+IK  GI+CSC+ CKGR
Sbjct: 155 TRIPRNLKDLLATGLLEGHPVKYIMRKGKRAVLRGVIKRVGILCSCSSCKGR 206


>ref|XP_002272497.2| PREDICTED: uncharacterized protein LOC100255152 [Vitis vinifera]
          Length = 863

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
 Frame = +3

Query: 3   LTKFPTKISELLETGMLKGLSVSYIFRVQQK----AGLCGIIKNRGIMCSCAVCKG 158
           L  FPTK+ ELL+TG+L+ L V YI  +++K    +GL G+IK  GI+C C  CKG
Sbjct: 209 LKGFPTKLKELLDTGILEDLPVQYIRGLRRKENGESGLHGVIKGSGILCYCDTCKG 264


>emb|CBI17123.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
 Frame = +3

Query: 3   LTKFPTKISELLETGMLKGLSVSYIFRVQQK----AGLCGIIKNRGIMCSCAVCKG 158
           L  FPTK+ ELL+TG+L+ L V YI  +++K    +GL G+IK  GI+C C  CKG
Sbjct: 271 LKGFPTKLKELLDTGILEDLPVQYIRGLRRKENGESGLHGVIKGSGILCYCDTCKG 326


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