BLASTX nr result

ID: Coptis23_contig00028522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028522
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70982.1| hypothetical protein VITISV_027119 [Vitis vinifera]   100   2e-19
ref|XP_003635473.1| PREDICTED: uncharacterized protein LOC100852...    99   3e-19
emb|CBI35725.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002533519.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_004143440.1| PREDICTED: uncharacterized protein LOC101223...    83   2e-14

>emb|CAN70982.1| hypothetical protein VITISV_027119 [Vitis vinifera]
          Length = 405

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 7/99 (7%)
 Frame = -2

Query: 289 KTHIHLQLRVRALLFDKASVSLFLRS-----SNLGASKLNLNYLQLHGDDVYFSLEDFSL 125
           +  I LQLR RALLFDKASVSLFLRS     S+L  SKLN +YLQLHGDDVYF+LE   +
Sbjct: 57  RAQIQLQLRARALLFDKASVSLFLRSPSTPTSSLPVSKLNPSYLQLHGDDVYFTLEQDVV 116

Query: 124 YGDQDL--SNSTQSKIPPKVGFSTGFKYGEPELDDISNR 14
              + +  SN+  SKI PK  FS G +Y E E+D+IS R
Sbjct: 117 QQREGVVASNTAPSKIQPKAAFSVGXRYAESEIDNISQR 155


>ref|XP_003635473.1| PREDICTED: uncharacterized protein LOC100852712, partial [Vitis
           vinifera]
          Length = 296

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 7/99 (7%)
 Frame = -2

Query: 289 KTHIHLQLRVRALLFDKASVSLFLRS-----SNLGASKLNLNYLQLHGDDVYFSLEDFSL 125
           +  I LQLR RALLFDKASVSLFLRS     S+L  SKLN +YLQLHGDDVYF+LE   +
Sbjct: 57  RAQIQLQLRARALLFDKASVSLFLRSPSTPTSSLPVSKLNPSYLQLHGDDVYFTLEQDVV 116

Query: 124 YGDQDL--SNSTQSKIPPKVGFSTGFKYGEPELDDISNR 14
              + +  SN+  SKI PK  FS G +Y E E+D+IS R
Sbjct: 117 QQREGVVASNTAPSKIQPKAAFSVGTRYAESEIDNISQR 155


>emb|CBI35725.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 7/99 (7%)
 Frame = -2

Query: 289 KTHIHLQLRVRALLFDKASVSLFLRS-----SNLGASKLNLNYLQLHGDDVYFSLEDFSL 125
           +  I LQLR RALLFDKASVSLFLRS     S+L  SKLN +YLQLHGDDVYF+LE   +
Sbjct: 57  RAQIQLQLRARALLFDKASVSLFLRSPSTPTSSLPVSKLNPSYLQLHGDDVYFTLEQDVV 116

Query: 124 YGDQDL--SNSTQSKIPPKVGFSTGFKYGEPELDDISNR 14
              + +  SN+  SKI PK  FS G +Y E E+D+IS R
Sbjct: 117 QQREGVVASNTAPSKIQPKAAFSVGTRYAESEIDNISQR 155


>ref|XP_002533519.1| conserved hypothetical protein [Ricinus communis]
           gi|223526616|gb|EEF28863.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 573

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
 Frame = -2

Query: 289 KTHIHLQLRVRALLFDKASVSLFLRSSN-----LGASKLNLNYLQLHGDDVYFSLEDFSL 125
           K  IHLQLR RALLFDKA+VSLF+ ++N     L  SKLN +YLQLHGDDVYF+LED   
Sbjct: 57  KAQIHLQLRARALLFDKATVSLFISNNNNSCSALAVSKLNPSYLQLHGDDVYFTLED--- 113

Query: 124 YGDQDLSNSTQSKIPPKVGFSTGFKYGEPELDDISNR 14
            GDQ   N+  SK   K  FS G +YGEPE++ ++ R
Sbjct: 114 -GDQ-RQNAALSKSHSKSAFSIGSRYGEPEMEGLTQR 148


>ref|XP_004143440.1| PREDICTED: uncharacterized protein LOC101223185 [Cucumis sativus]
           gi|449499810|ref|XP_004160923.1| PREDICTED:
           uncharacterized protein LOC101224095 [Cucumis sativus]
          Length = 612

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 54/114 (47%), Positives = 63/114 (55%), Gaps = 22/114 (19%)
 Frame = -2

Query: 289 KTHIHLQLRVRALLFDKASVSLFLRS-----------------SNLGASKLNLNYLQLHG 161
           +  I LQLR RALLFDKASVSLFLRS                 S+L  SKL+ NYLQLHG
Sbjct: 57  RAQIQLQLRARALLFDKASVSLFLRSTPSPSSPSYSTGNPLSSSSLAISKLSPNYLQLHG 116

Query: 160 DDVYFSLEDFSLYGDQD-----LSNSTQSKIPPKVGFSTGFKYGEPELDDISNR 14
           DDVYF+LE+ S  G Q       SN    KI PK   + G +  E ++ D S R
Sbjct: 117 DDVYFTLENSSKDGVQQREGHVSSNKASGKIQPKAASTAGPRSRESDIGDSSQR 170


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