BLASTX nr result

ID: Coptis23_contig00028504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028504
         (1617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315881.1| predicted protein [Populus trichocarpa] gi|2...   285   2e-74
ref|XP_002875072.1| hypothetical protein ARALYDRAFT_322489 [Arab...   285   3e-74
ref|XP_003581096.1| PREDICTED: uncharacterized protein LOC100840...   281   3e-73
emb|CBI26899.3| unnamed protein product [Vitis vinifera]              281   5e-73
ref|XP_002526026.1| uridine cytidine kinase I, putative [Ricinus...   281   5e-73

>ref|XP_002315881.1| predicted protein [Populus trichocarpa] gi|222864921|gb|EEF02052.1|
            predicted protein [Populus trichocarpa]
          Length = 842

 Score =  285 bits (729), Expect = 2e-74
 Identities = 147/177 (83%), Positives = 156/177 (88%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528  LIALKIRNDFDPMLSP*SSLFVLKSKVQVEYQDIIKILDAAKLCSSVQNFTDIYLRLPGT 349
            +  LKIRNDFDP+LSP SSLFVLKS  QV  QDI+KILD  KLCS VQNF DIYLRLPG 
Sbjct: 629  IAVLKIRNDFDPVLSPESSLFVLKSNKQVASQDILKILDPVKLCSFVQNFIDIYLRLPGL 688

Query: 348  P-NGQLAESECIRVRLCEGRFALLIREPIREGNFIIQPKVDFDISISTVSGLLNLGYQAV 172
            P NGQLAES+CIR R+CEGRFALLIREPIREGNFIIQPKVDFDIS STV+GLLNLGYQAV
Sbjct: 689  PTNGQLAESDCIRFRICEGRFALLIREPIREGNFIIQPKVDFDISTSTVAGLLNLGYQAV 748

Query: 171  AYIEASALIYQDGKILIEVDHLQDTPNPYIQIKGTNREVVTAAGSTLGLDGSYTTKS 1
            A IEASA IYQDGKILIEVDHLQDTP+PY+QIKG N+E V AAGSTL LDGSYTTKS
Sbjct: 749  ACIEASAYIYQDGKILIEVDHLQDTPSPYLQIKGVNKEAVAAAGSTLKLDGSYTTKS 805



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 37/128 (28%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
 Frame = -1

Query: 381 FTDIYLRLPGTPNGQLAESECIRVRLCEGRFALLIREP-IREGNFIIQPKVDFDISISTV 205
           F ++YLR P      L  ++ I+VR    ++ L + +  I + NFII+PK +F++   T+
Sbjct: 249 FIEMYLRPPSASEEALT-NDWIKVRQSGIKYYLSLGDQRIVDKNFIIRPKAEFEVGRMTL 307

Query: 204 SGLLNLGYQAVAYIEASALIYQDGKILIEVDHLQDTPNPYIQIKGTNREVVTAAGSTLGL 25
            GLL LGY  V   + ++    +G + + ++ +      ++ ++G NR+ V A  + +G+
Sbjct: 308 GGLLALGYNVVVSYKRASSSVSNGNLSLSLETIDTLGETFVVLRGMNRKTVGAEATRMGV 367

Query: 24  DGSYTTKS 1
           +G + TKS
Sbjct: 368 NGPWITKS 375


>ref|XP_002875072.1| hypothetical protein ARALYDRAFT_322489 [Arabidopsis lyrata subsp.
            lyrata] gi|297320910|gb|EFH51331.1| hypothetical protein
            ARALYDRAFT_322489 [Arabidopsis lyrata subsp. lyrata]
          Length = 945

 Score =  285 bits (728), Expect = 3e-74
 Identities = 143/174 (82%), Positives = 156/174 (89%), Gaps = 1/174 (0%)
 Frame = -1

Query: 519  LKIRNDFDPMLSP*SSLFVLKSKVQVEYQDIIKILDAAKLCSSVQNFTDIYLRLPGTP-N 343
            +KIRNDFDP+LSP SSLFVLKS  QV YQDI+ ILD+ K CSSVQNF DIY RL G P N
Sbjct: 674  VKIRNDFDPVLSPESSLFVLKSNKQVPYQDILSILDSTKFCSSVQNFIDIYFRLSGLPAN 733

Query: 342  GQLAESECIRVRLCEGRFALLIREPIREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYI 163
            GQL++S+CIRVR+CEGRFA+LIREPIREGNFIIQPKVDFDIS+STV+GLLNLGYQAVAYI
Sbjct: 734  GQLSDSDCIRVRICEGRFAVLIREPIREGNFIIQPKVDFDISVSTVAGLLNLGYQAVAYI 793

Query: 162  EASALIYQDGKILIEVDHLQDTPNPYIQIKGTNREVVTAAGSTLGLDGSYTTKS 1
            EASA IYQDGKILIEVDHLQD P+PYIQIKG N+E VTAAGS L LDGSYTTKS
Sbjct: 794  EASAFIYQDGKILIEVDHLQDVPSPYIQIKGANKEAVTAAGSALKLDGSYTTKS 847


>ref|XP_003581096.1| PREDICTED: uncharacterized protein LOC100840996 [Brachypodium
            distachyon]
          Length = 924

 Score =  281 bits (719), Expect = 3e-73
 Identities = 140/174 (80%), Positives = 157/174 (90%), Gaps = 1/174 (0%)
 Frame = -1

Query: 519  LKIRNDFDPMLSP*SSLFVLKSKVQVEYQDIIKILDAAKLCSSVQNFTDIYLRLPGTP-N 343
            LKI+NDFDP+LSP SS FVLKS  QV YQDI+K+LDA+K+CSSVQNFTD+YLRLPG P N
Sbjct: 653  LKIQNDFDPVLSPESSPFVLKSTKQVSYQDILKVLDASKVCSSVQNFTDVYLRLPGIPSN 712

Query: 342  GQLAESECIRVRLCEGRFALLIREPIREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYI 163
            GQL E ECIRVR+CEGRFALLIREPIREGNFIIQPKVDFDIS STV+GLL LGYQAVAYI
Sbjct: 713  GQLTEGECIRVRICEGRFALLIREPIREGNFIIQPKVDFDISASTVAGLLKLGYQAVAYI 772

Query: 162  EASALIYQDGKILIEVDHLQDTPNPYIQIKGTNREVVTAAGSTLGLDGSYTTKS 1
            EASA+IYQDGKILIEVDHLQ   NPY+QIKGTN+++V++A S L L+GSYTTKS
Sbjct: 773  EASAVIYQDGKILIEVDHLQGVTNPYLQIKGTNKDIVSSAASALNLEGSYTTKS 826



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
 Frame = -1

Query: 459 KSKVQVEYQDIIKILDAAKLCSSVQNFTDIYLRLPGTPNGQLAESECIRVRLCEGRFALL 280
           K K + E QD  KI    K      NF ++YLR P   + ++   + I+V  C  R+ L 
Sbjct: 249 KLKCKYESQDGQKIYSFDKSKPETDNFIEMYLR-PPFASEEMKIDDWIKVTQCGIRYYLS 307

Query: 279 IREP-IREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYIEASALIYQDGKILIEVDHLQ 103
           + +  I +  FII+PK +F++  +T+ GLL LGY  V   + +       ++LI  + + 
Sbjct: 308 LGDQRIVDKYFIIRPKAEFEVGRTTLGGLLALGYSVVVSFKRTCRTVNRDQLLIAAESID 367

Query: 102 DTPNPYIQIKGTNREVVTAAGSTLGLDGSYTTKS 1
                ++ +KG +R++V A  S LG+ G + TKS
Sbjct: 368 SLNESFLVLKGPSRKIVAAEASNLGIKGPWITKS 401


>emb|CBI26899.3| unnamed protein product [Vitis vinifera]
          Length = 981

 Score =  281 bits (718), Expect = 5e-73
 Identities = 147/174 (84%), Positives = 156/174 (89%), Gaps = 1/174 (0%)
 Frame = -1

Query: 519  LKIRNDFDPMLSP*SSLFVLKSKVQVEYQDIIKILDAAKLCSSVQNFTDIYLRLPGTP-N 343
            LKIRNDFDP+LSP SSLFVLKS  QV YQDI+KILD AK CSSVQNF DIYL+LPGT  N
Sbjct: 713  LKIRNDFDPVLSPESSLFVLKSNKQVAYQDILKILDPAKFCSSVQNFIDIYLKLPGTSAN 772

Query: 342  GQLAESECIRVRLCEGRFALLIREPIREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYI 163
            G L ES+CIRVR+CEGRFALLIREPIREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYI
Sbjct: 773  GFLTESDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYI 832

Query: 162  EASALIYQDGKILIEVDHLQDTPNPYIQIKGTNREVVTAAGSTLGLDGSYTTKS 1
            EASA IYQDGKILIEVD+LQD  +PY+QIKG N+E V AAGSTL LDGSYTTKS
Sbjct: 833  EASAFIYQDGKILIEVDNLQDV-SPYLQIKGVNKEAVAAAGSTLKLDGSYTTKS 885



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
 Frame = -1

Query: 396 SSVQNFTDIYLRLPGTPNGQLAESECIRVRLCEGRFALLIREP-IREGNFIIQPKVDFDI 220
           +   NF ++YLR P + N +   ++ I+VR    R+ L + +  I + N+II+PK +F++
Sbjct: 258 AQTDNFIEMYLR-PPSANEEARINDWIKVRQSGIRYYLSLGDQRIVDKNYIIRPKAEFEV 316

Query: 219 SISTVSGLLNLGYQAVAYIEASALIYQDGKILIEVDHLQDTPNPYIQIKGTNREVVTAAG 40
              T+ GLL LGY  V   + ++    +G + +  + +      ++ ++GT+R+ V A  
Sbjct: 317 GRMTLGGLLALGYTVVVSYKRASTSVSNGHLSMSFETIDSLGETFMVLRGTDRKTVGAEV 376

Query: 39  STLGLDGSYTTKS 1
             +G++G + TKS
Sbjct: 377 LRMGVNGPWITKS 389


>ref|XP_002526026.1| uridine cytidine kinase I, putative [Ricinus communis]
            gi|223534673|gb|EEF36366.1| uridine cytidine kinase I,
            putative [Ricinus communis]
          Length = 975

 Score =  281 bits (718), Expect = 5e-73
 Identities = 143/174 (82%), Positives = 156/174 (89%), Gaps = 1/174 (0%)
 Frame = -1

Query: 519  LKIRNDFDPMLSP*SSLFVLKSKVQVEYQDIIKILDAAKLCSSVQNFTDIYLRLPGTP-N 343
            LKIRNDFDP+LSP SSLFVLKS  QV  QDI+KILD+AK CSSVQNF DIYL+LPG P N
Sbjct: 644  LKIRNDFDPVLSPESSLFVLKSNKQVSDQDILKILDSAKFCSSVQNFIDIYLKLPGIPAN 703

Query: 342  GQLAESECIRVRLCEGRFALLIREPIREGNFIIQPKVDFDISISTVSGLLNLGYQAVAYI 163
             QLAES+CIRVR+CEGRFALLIREPIREGNFI+QPKVDFDISISTV+GLLNLGYQAVAYI
Sbjct: 704  EQLAESDCIRVRICEGRFALLIREPIREGNFIVQPKVDFDISISTVAGLLNLGYQAVAYI 763

Query: 162  EASALIYQDGKILIEVDHLQDTPNPYIQIKGTNREVVTAAGSTLGLDGSYTTKS 1
            EASA IYQDGKILIEVDH+QD  +PY+QIKG ++E V AAGS L LDGSYTTKS
Sbjct: 764  EASAFIYQDGKILIEVDHIQDASSPYLQIKGASKEAVAAAGSMLKLDGSYTTKS 817


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