BLASTX nr result

ID: Coptis23_contig00028480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028480
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchor...   280   7e-74
ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|2...   279   2e-73
ref|XP_002513796.1| LysM domain GPI-anchored protein 1 precursor...   278   2e-73
gb|ACD56618.1| peptidoglycan-binding LysM domain-containing rela...   278   3e-73
ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchor...   278   3e-73

>ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
           [Cucumis sativus] gi|449528597|ref|XP_004171290.1|
           PREDICTED: lysM domain-containing GPI-anchored protein
           1-like [Cucumis sativus]
          Length = 432

 Score =  280 bits (717), Expect = 7e-74
 Identities = 131/165 (79%), Positives = 153/165 (92%)
 Frame = -2

Query: 495 VHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISYPDVENH 316
           V +KSTIEPCSNSD+CNA+LGYTLYTDLKVSEV +LFQVDP+S+LT NAID+SYPDVENH
Sbjct: 31  VSAKSTIEPCSNSDSCNALLGYTLYTDLKVSEVGSLFQVDPISILTANAIDVSYPDVENH 90

Query: 315 ILPSQLFLKIPITCSCVDGIRKSVSTRYKTRPSDTLGSIAGLVFSGLVSADQIRDANSIS 136
           ILPSQLF+KIPI+CSCVDGIRKSVSTRYKTRPSDTL SIA  +++GLVS+DQIR+ANSIS
Sbjct: 91  ILPSQLFIKIPISCSCVDGIRKSVSTRYKTRPSDTLSSIADSIYAGLVSSDQIREANSIS 150

Query: 135 DPNVLDVGMSLVVPMPCTCFNSTDNFMPAVYLSYLVMPMDSLVGI 1
           DP++LDVG +LVVP+PCTCFN TDN +PA+YLSY+V P D+L GI
Sbjct: 151 DPSLLDVGQTLVVPLPCTCFNGTDNSLPAIYLSYVVQPEDTLTGI 195


>ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|222842720|gb|EEE80267.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  279 bits (713), Expect = 2e-73
 Identities = 133/166 (80%), Positives = 152/166 (91%)
 Frame = -2

Query: 498 LVHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISYPDVEN 319
           LV SKSTIEPC+NSD+CNA+L YTLYTDLKVSEVA+LFQ+DP++LLTTNAIDISYPDVEN
Sbjct: 19  LVTSKSTIEPCTNSDSCNALLAYTLYTDLKVSEVASLFQIDPIALLTTNAIDISYPDVEN 78

Query: 318 HILPSQLFLKIPITCSCVDGIRKSVSTRYKTRPSDTLGSIAGLVFSGLVSADQIRDANSI 139
           HILPSQLFLKIPITCSCVDGIRKSVST YKTRPSDTL SIA  +++GLVSADQI++ANSI
Sbjct: 79  HILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYAGLVSADQIKEANSI 138

Query: 138 SDPNVLDVGMSLVVPMPCTCFNSTDNFMPAVYLSYLVMPMDSLVGI 1
            DP+VLDVG SLVVP+PCTCFN TDN +PA+YLSY+V  +D+L  I
Sbjct: 139 DDPSVLDVGQSLVVPLPCTCFNGTDNSLPAIYLSYVVKEVDTLAAI 184


>ref|XP_002513796.1| LysM domain GPI-anchored protein 1 precursor, putative [Ricinus
           communis] gi|223546882|gb|EEF48379.1| LysM domain
           GPI-anchored protein 1 precursor, putative [Ricinus
           communis]
          Length = 410

 Score =  278 bits (712), Expect = 2e-73
 Identities = 132/165 (80%), Positives = 151/165 (91%)
 Frame = -2

Query: 495 VHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISYPDVENH 316
           V SKSTIEPCSN+D+CNA+LGYTLYTDLKVSEVA+LFQ+DP++LLT N+IDISYPDVENH
Sbjct: 20  VTSKSTIEPCSNNDSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANSIDISYPDVENH 79

Query: 315 ILPSQLFLKIPITCSCVDGIRKSVSTRYKTRPSDTLGSIAGLVFSGLVSADQIRDANSIS 136
           ILPSQLFLKIPI CSCVDGIRKSVST YKTRPSDTL SIA  ++SGLVSADQI++ANSI 
Sbjct: 80  ILPSQLFLKIPIICSCVDGIRKSVSTHYKTRPSDTLASIADSIYSGLVSADQIKEANSIQ 139

Query: 135 DPNVLDVGMSLVVPMPCTCFNSTDNFMPAVYLSYLVMPMDSLVGI 1
           DP+VLDVG SLVVP+PCTCFN TDN +PA+YLSY+V  +D+L GI
Sbjct: 140 DPSVLDVGQSLVVPLPCTCFNGTDNLLPAIYLSYVVKDVDTLAGI 184


>gb|ACD56618.1| peptidoglycan-binding LysM domain-containing related protein
           [Gossypioides kirkii]
          Length = 453

 Score =  278 bits (711), Expect = 3e-73
 Identities = 133/166 (80%), Positives = 153/166 (92%)
 Frame = -2

Query: 498 LVHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISYPDVEN 319
           LV SKSTIEPCSNSD+CNA+LGYTLYTDLKV+EVA+LFQVDP+S+LT NAIDISYPDVEN
Sbjct: 25  LVTSKSTIEPCSNSDSCNALLGYTLYTDLKVAEVASLFQVDPISILTANAIDISYPDVEN 84

Query: 318 HILPSQLFLKIPITCSCVDGIRKSVSTRYKTRPSDTLGSIAGLVFSGLVSADQIRDANSI 139
           HILPS+LFLKIPI CSCVDGIRKSVST+YKTRP DTL SIA  +++GLVSADQIR+ANSI
Sbjct: 85  HILPSKLFLKIPILCSCVDGIRKSVSTKYKTRPQDTLSSIADSIYAGLVSADQIREANSI 144

Query: 138 SDPNVLDVGMSLVVPMPCTCFNSTDNFMPAVYLSYLVMPMDSLVGI 1
           SDP+VLDVG +LVVP+PCTCFN TDN +PA+YLSY+V  +D+L GI
Sbjct: 145 SDPSVLDVGENLVVPLPCTCFNGTDNGLPAIYLSYVVKAVDTLAGI 190


>ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchored protein 1 [Vitis
           vinifera]
          Length = 418

 Score =  278 bits (711), Expect = 3e-73
 Identities = 133/166 (80%), Positives = 151/166 (90%)
 Frame = -2

Query: 498 LVHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISYPDVEN 319
           +V SKSTIEPCSNSD+CNAM+GYTLYTDLKVSEVA LFQVDP+++LT NAIDISYPDVEN
Sbjct: 23  VVRSKSTIEPCSNSDSCNAMVGYTLYTDLKVSEVATLFQVDPIAILTANAIDISYPDVEN 82

Query: 318 HILPSQLFLKIPITCSCVDGIRKSVSTRYKTRPSDTLGSIAGLVFSGLVSADQIRDANSI 139
           HILPSQLFLKIPI CSCVDGIRKSV+TRYKTRPSDTL SIA  +++GLVSADQ+R+ANSI
Sbjct: 83  HILPSQLFLKIPIYCSCVDGIRKSVTTRYKTRPSDTLSSIADSIYAGLVSADQLREANSI 142

Query: 138 SDPNVLDVGMSLVVPMPCTCFNSTDNFMPAVYLSYLVMPMDSLVGI 1
           SDP+VLDVG +LVVP+PCTCFN TDN +PA YLSY+V   D+L GI
Sbjct: 143 SDPSVLDVGQTLVVPLPCTCFNGTDNLLPATYLSYVVKVDDTLTGI 188


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