BLASTX nr result

ID: Coptis23_contig00028473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028473
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298329.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_004171881.1| PREDICTED: uncharacterized LOC101207800, par...    59   4e-07
ref|XP_004154213.1| PREDICTED: uncharacterized protein LOC101207...    59   4e-07
ref|XP_004145323.1| PREDICTED: uncharacterized protein LOC101205...    59   4e-07
gb|EEE52791.1| hypothetical protein OsJ_35269 [Oryza sativa Japo...    59   5e-07

>ref|XP_002298329.1| predicted protein [Populus trichocarpa] gi|222845587|gb|EEE83134.1|
           predicted protein [Populus trichocarpa]
          Length = 1327

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/58 (56%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -2

Query: 180 LISSNEAFQLQCTDLYCKPCLTYFVSTN*ACSFSNEYLYNL-L*PLI*SNTTLSETIG 10
           L+  NEA Q QCT LYCKPCLTY VST  AC +    +      PLI SN TL+ETIG
Sbjct: 26  LVYPNEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLIESNKTLAETIG 83


>ref|XP_004171881.1| PREDICTED: uncharacterized LOC101207800, partial [Cucumis sativus]
          Length = 891

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -2

Query: 180 LISSNEAFQLQCTDLYCKPCLTYFVSTN*ACSFSNEYLYNL-L*PLI*SNTTLSETIG 10
           L+  +EA Q QCT LYCKPCLTY VST  AC +    +      PL+ SN TL+ETIG
Sbjct: 26  LVYPHEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLVESNKTLAETIG 83


>ref|XP_004154213.1| PREDICTED: uncharacterized protein LOC101207800, partial [Cucumis
           sativus]
          Length = 271

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -2

Query: 180 LISSNEAFQLQCTDLYCKPCLTYFVSTN*ACSFSNEYLYNL-L*PLI*SNTTLSETIG 10
           L+  +EA Q QCT LYCKPCLTY VST  AC +    +      PL+ SN TL+ETIG
Sbjct: 26  LVYPHEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLVESNKTLAETIG 83


>ref|XP_004145323.1| PREDICTED: uncharacterized protein LOC101205914 [Cucumis sativus]
          Length = 1434

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -2

Query: 180 LISSNEAFQLQCTDLYCKPCLTYFVSTN*ACSFSNEYLYNL-L*PLI*SNTTLSETIG 10
           L+  +EA Q QCT LYCKPCLTY VST  AC +    +      PL+ SN TL+ETIG
Sbjct: 26  LVYPHEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLVESNKTLAETIG 83


>gb|EEE52791.1| hypothetical protein OsJ_35269 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = -2

Query: 204 CPSLVGCTLISSNEAFQLQCTDLYCKPCLTYFVSTN*ACSFSNEYLYNL-L*PLI*SNTT 28
           CP  V  TLI  NEA Q QCT LYCKPCL Y V+T  AC +    +      PL+ SN  
Sbjct: 20  CP--VCRTLICPNEALQTQCTHLYCKPCLAYIVATTQACPYDGYLVTEADSKPLMESNKP 77

Query: 27  LSETIG 10
           L+ETIG
Sbjct: 78  LAETIG 83


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