BLASTX nr result
ID: Coptis23_contig00028466
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028466 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine ... 62 4e-08 ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|35... 61 8e-08 gb|ABE80160.2| Prefoldin [Medicago truncatula] 61 8e-08 ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vi... 59 3e-07 ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|2... 55 5e-06 >ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine max] Length = 689 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/52 (63%), Positives = 38/52 (73%) Frame = -3 Query: 158 KQVADLRQQIDVKEAIQEDLRRRILNIHQHGSSPKLEASKGIEFEREILEAE 3 KQVA+LRQQI KE E+LRRR+ N Q G+S ASKG+E EREILEAE Sbjct: 442 KQVAELRQQITSKELFHEELRRRMTNPRQTGASQNQLASKGVELEREILEAE 493 >ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|355525116|gb|AET05570.1| Golgin candidate [Medicago truncatula] Length = 667 Score = 61.2 bits (147), Expect = 8e-08 Identities = 31/52 (59%), Positives = 41/52 (78%) Frame = -3 Query: 158 KQVADLRQQIDVKEAIQEDLRRRILNIHQHGSSPKLEASKGIEFEREILEAE 3 KQVA+LRQ++ KE++ E+LRR + N +Q G+S ASKG+EFEREILEAE Sbjct: 421 KQVAELRQKMASKESVHEELRRSLRNPNQTGASRNQLASKGVEFEREILEAE 472 >gb|ABE80160.2| Prefoldin [Medicago truncatula] Length = 268 Score = 61.2 bits (147), Expect = 8e-08 Identities = 31/52 (59%), Positives = 41/52 (78%) Frame = -3 Query: 158 KQVADLRQQIDVKEAIQEDLRRRILNIHQHGSSPKLEASKGIEFEREILEAE 3 KQVA+LRQ++ KE++ E+LRR + N +Q G+S ASKG+EFEREILEAE Sbjct: 22 KQVAELRQKMASKESVHEELRRSLRNPNQTGASRNQLASKGVEFEREILEAE 73 >ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vinifera] Length = 682 Score = 59.3 bits (142), Expect = 3e-07 Identities = 31/52 (59%), Positives = 41/52 (78%), Gaps = 1/52 (1%) Frame = -3 Query: 155 QVADLRQQIDVKEAIQEDLRRRILNIHQHGSS-PKLEASKGIEFEREILEAE 3 +VA++RQQI++KE E+ RRRI N HQ G+S L A+KG+EFE+EILEAE Sbjct: 443 RVAEIRQQIELKEVALEEQRRRIPNAHQMGTSLSHLVAAKGVEFEKEILEAE 494 >ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|222869090|gb|EEF06221.1| predicted protein [Populus trichocarpa] Length = 567 Score = 55.5 bits (132), Expect = 5e-06 Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Frame = -3 Query: 173 LVFKSKQVADLRQQIDVKEAIQEDLRRRILNIHQHGS-SPKLEASKGIEFEREILEAE 3 L + QVA+LRQQ ++KE EDLRRRI HQ + + ASKG++FEREILE E Sbjct: 304 LELEINQVAELRQQFELKEVALEDLRRRISKTHQTETYLNQAAASKGVQFEREILETE 361