BLASTX nr result

ID: Coptis23_contig00028466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028466
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine ...    62   4e-08
ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|35...    61   8e-08
gb|ABE80160.2| Prefoldin [Medicago truncatula]                         61   8e-08
ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vi...    59   3e-07
ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine max]
          Length = 689

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -3

Query: 158 KQVADLRQQIDVKEAIQEDLRRRILNIHQHGSSPKLEASKGIEFEREILEAE 3
           KQVA+LRQQI  KE   E+LRRR+ N  Q G+S    ASKG+E EREILEAE
Sbjct: 442 KQVAELRQQITSKELFHEELRRRMTNPRQTGASQNQLASKGVELEREILEAE 493


>ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|355525116|gb|AET05570.1|
           Golgin candidate [Medicago truncatula]
          Length = 667

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = -3

Query: 158 KQVADLRQQIDVKEAIQEDLRRRILNIHQHGSSPKLEASKGIEFEREILEAE 3
           KQVA+LRQ++  KE++ E+LRR + N +Q G+S    ASKG+EFEREILEAE
Sbjct: 421 KQVAELRQKMASKESVHEELRRSLRNPNQTGASRNQLASKGVEFEREILEAE 472


>gb|ABE80160.2| Prefoldin [Medicago truncatula]
          Length = 268

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = -3

Query: 158 KQVADLRQQIDVKEAIQEDLRRRILNIHQHGSSPKLEASKGIEFEREILEAE 3
           KQVA+LRQ++  KE++ E+LRR + N +Q G+S    ASKG+EFEREILEAE
Sbjct: 22  KQVAELRQKMASKESVHEELRRSLRNPNQTGASRNQLASKGVEFEREILEAE 73


>ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vinifera]
          Length = 682

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/52 (59%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
 Frame = -3

Query: 155 QVADLRQQIDVKEAIQEDLRRRILNIHQHGSS-PKLEASKGIEFEREILEAE 3
           +VA++RQQI++KE   E+ RRRI N HQ G+S   L A+KG+EFE+EILEAE
Sbjct: 443 RVAEIRQQIELKEVALEEQRRRIPNAHQMGTSLSHLVAAKGVEFEKEILEAE 494


>ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|222869090|gb|EEF06221.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = -3

Query: 173 LVFKSKQVADLRQQIDVKEAIQEDLRRRILNIHQHGS-SPKLEASKGIEFEREILEAE 3
           L  +  QVA+LRQQ ++KE   EDLRRRI   HQ  +   +  ASKG++FEREILE E
Sbjct: 304 LELEINQVAELRQQFELKEVALEDLRRRISKTHQTETYLNQAAASKGVQFEREILETE 361


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