BLASTX nr result

ID: Coptis23_contig00028465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028465
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303543.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_002509644.1| leucine-rich repeat transmembrane protein ki...   155   2e-36
ref|XP_002299581.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|XP_003611204.1| Protein kinase like protein [Medicago trunca...   150   1e-34
ref|XP_003516680.1| PREDICTED: probable LRR receptor-like serine...   145   3e-33

>ref|XP_002303543.1| predicted protein [Populus trichocarpa] gi|222840975|gb|EEE78522.1|
           predicted protein [Populus trichocarpa]
          Length = 883

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/113 (65%), Positives = 87/113 (76%)
 Frame = +3

Query: 6   ALFKNCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFV 185
           ALFK C+KT+F+S +HN+LS SIP SI NC NL GFDFSFNN SG  PS IC IP + ++
Sbjct: 164 ALFKFCYKTKFVSFSHNSLSGSIPASIANCTNLEGFDFSFNNFSGELPSGICDIPVLEYM 223

Query: 186 SLRSNSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           SLRSN L G V E+V  CQ L FLDLGSN FTGLAPF+++G  N+SYFNVS N
Sbjct: 224 SLRSNVLTGSVLEEVSKCQRLRFLDLGSNLFTGLAPFEILGSQNLSYFNVSHN 276



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = +3

Query: 51  HN-NLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRSNSLVGDVREQ 227
           HN NLS  IP  I NC  L   D S N L G  P+ +  + ++  + L  N L G + E 
Sbjct: 370 HNLNLSGEIPKDISNCRFLRELDVSGNALDGEIPNTLDNMTSLEVLDLHRNQLDGSIPET 429

Query: 228 VLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           +    +L+ L+L  N  +G  P+ +  L N+ YFNVS N
Sbjct: 430 LGSLSNLKLLELSQNNLSGTIPYSLGKLANLKYFNVSSN 468



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/108 (30%), Positives = 49/108 (45%)
 Frame = +3

Query: 21  CFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRSN 200
           C + RF+ L  N  +   P  I    NL  F+ S N   G  P+      ++ F    SN
Sbjct: 241 CQRLRFLDLGSNLFTGLAPFEILGSQNLSYFNVSHNAFQGEIPAMRTCSESLEFFDASSN 300

Query: 201 SLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           +L G++   +  C+SLEF+DLG N   G  P  +  L  +  F +  N
Sbjct: 301 NLDGEIPLGITNCKSLEFIDLGFNRLNGSIPAGIANLERLLVFKLGDN 348



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/110 (27%), Positives = 54/110 (49%)
 Frame = +3

Query: 18  NCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRS 197
           NC    FI L  N L+ SIP  I N   L+ F    N++ G+ P++   I  +  + L +
Sbjct: 312 NCKSLEFIDLGFNRLNGSIPAGIANLERLLVFKLGDNSIQGTIPAEFGSIEWLLLLDLHN 371

Query: 198 NSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFNR 347
            +L G++ + +  C+ L  LD+  N   G  P  +  +T++   ++  N+
Sbjct: 372 LNLSGEIPKDISNCRFLRELDVSGNALDGEIPNTLDNMTSLEVLDLHRNQ 421



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/103 (31%), Positives = 48/103 (46%)
 Frame = +3

Query: 36  FISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRSNSLVGD 215
           F   + NNL   IP+ I NC +L   D  FN L+GS P+ I  +  +    L  NS+ G 
Sbjct: 294 FFDASSNNLDGEIPLGITNCKSLEFIDLGFNRLNGSIPAGIANLERLLVFKLGDNSIQGT 353

Query: 216 VREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           +  +    + L  LDL +   +G  P D+     +   +VS N
Sbjct: 354 IPAEFGSIEWLLLLDLHNLNLSGEIPKDISNCRFLRELDVSGN 396


>ref|XP_002509644.1| leucine-rich repeat transmembrane protein kinase, putative [Ricinus
           communis] gi|223549543|gb|EEF51031.1| leucine-rich
           repeat transmembrane protein kinase, putative [Ricinus
           communis]
          Length = 884

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/113 (62%), Positives = 88/113 (77%)
 Frame = +3

Query: 6   ALFKNCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFV 185
           +LFK C+KT+F SL+HN+LS  IP+S+ NC  L GFDFSFNNLSG  PS+IC IP + ++
Sbjct: 163 SLFKFCYKTKFASLSHNSLSGQIPVSLVNCAKLEGFDFSFNNLSGQLPSEICSIPVLKYM 222

Query: 186 SLRSNSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           SLRSN L G V+E++L CQ L FLDLGSN F+GLAPF  +G  NMSYFN S+N
Sbjct: 223 SLRSNVLTGSVQEEILRCQRLNFLDLGSNMFSGLAPFGALGFKNMSYFNASYN 275



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = +3

Query: 51  HN-NLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRSNSLVGDVREQ 227
           HN +L+  IP  I N + L   D S N+LSG  PS    +  +  + L  N   G + E 
Sbjct: 369 HNLHLNGEIPRDISNSMTLCELDLSGNDLSGEIPSTFYNMTWLEVLDLHRNQFNGSIPET 428

Query: 228 VLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           V    +L+ LDL  N  +G  P  +  L N++YFN+S N
Sbjct: 429 VGNLSNLKVLDLSQNNLSGSIPSSLGNLPNLTYFNLSSN 467



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/69 (42%), Positives = 39/69 (56%)
 Frame = +3

Query: 12  FKNCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSL 191
           F N      + L  N  + SIP ++GN  NL   D S NNLSGS PS +  +PN+ + +L
Sbjct: 405 FYNMTWLEVLDLHRNQFNGSIPETVGNLSNLKVLDLSQNNLSGSIPSSLGNLPNLTYFNL 464

Query: 192 RSNSLVGDV 218
            SNSL G +
Sbjct: 465 SSNSLSGPI 473



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = +3

Query: 33  RFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRSNSLVG 212
           R ++L  N  + +IP        L   + S N LSGS P  I  +PN+ F+ L  NS  G
Sbjct: 99  RILTLFGNKFTGNIPQEYAELSTLWKINLSSNALSGSIPEFIGDLPNIRFLDLSRNSYNG 158

Query: 213 DVREQVL-VCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           ++   +   C   +F  L  N  +G  P  ++    +  F+ SFN
Sbjct: 159 EIPSSLFKFCYKTKFASLSHNSLSGQIPVSLVNCAKLEGFDFSFN 203


>ref|XP_002299581.1| predicted protein [Populus trichocarpa] gi|222846839|gb|EEE84386.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/113 (62%), Positives = 87/113 (76%)
 Frame = +3

Query: 6   ALFKNCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFV 185
           ALFK C+KT+F+S +HN+LS  +P SI NC NL GFDFSFNNLSG  PS IC +P + ++
Sbjct: 164 ALFKFCYKTKFVSFSHNSLSGPVPASIANCTNLEGFDFSFNNLSGQLPSGICDVPVLEYM 223

Query: 186 SLRSNSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           SLRSN L G V E++  CQ L FLDLGSN FTGLAPF ++GL N+SYFN+S N
Sbjct: 224 SLRSNVLTGSVLEEISNCQRLSFLDLGSNMFTGLAPFGILGLQNLSYFNLSHN 276



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = +3

Query: 51  HN-NLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRSNSLVGDVREQ 227
           HN NL+  IP  I NC  L   D S N L G  P+ +  + ++  + L  N L G + E 
Sbjct: 370 HNLNLAGEIPKDISNCRFLRELDVSGNALDGEIPNTLDNLTSLEVLDLHRNQLDGGIPET 429

Query: 228 VLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           +    +L+ LDL  N  +G  PF +  L N+ +FNVS N
Sbjct: 430 LGSLSNLKLLDLSQNNLSGNIPFSLGNLANLKFFNVSSN 468



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/110 (28%), Positives = 54/110 (49%)
 Frame = +3

Query: 18  NCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRS 197
           NC    FI L  N L+ SIP+ I N   L+ F    N++ G+ P +   I  +  + L +
Sbjct: 312 NCKSLEFIDLGFNRLNGSIPVGIANLERLLVFKLGNNSIKGTIPREFGSIELLLLLDLHN 371

Query: 198 NSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFNR 347
            +L G++ + +  C+ L  LD+  N   G  P  +  LT++   ++  N+
Sbjct: 372 LNLAGEIPKDISNCRFLRELDVSGNALDGEIPNTLDNLTSLEVLDLHRNQ 421



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/109 (30%), Positives = 47/109 (43%)
 Frame = +3

Query: 18  NCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRS 197
           NC +  F+ L  N  +   P  I    NL  F+ S N   G  P       ++ F    S
Sbjct: 240 NCQRLSFLDLGSNMFTGLAPFGILGLQNLSYFNLSHNGFQGGIPEVRTCSESLKFFDASS 299

Query: 198 NSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           N L G++   +  C+SLEF+DLG N   G  P  +  L  +  F +  N
Sbjct: 300 NELEGEIPLGITNCKSLEFIDLGFNRLNGSIPVGIANLERLLVFKLGNN 348


>ref|XP_003611204.1| Protein kinase like protein [Medicago truncatula]
           gi|355512539|gb|AES94162.1| Protein kinase like protein
           [Medicago truncatula]
          Length = 890

 Score =  150 bits (379), Expect = 1e-34
 Identities = 68/113 (60%), Positives = 88/113 (77%)
 Frame = +3

Query: 6   ALFKNCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFV 185
           ALF+ C+KT+F+SL+HNNL  SIP+S+ NC NL GFDFSFNNLSG  PS++C IP +++V
Sbjct: 164 ALFRYCYKTKFVSLSHNNLVGSIPVSLVNCSNLEGFDFSFNNLSGVVPSRLCDIPMLSYV 223

Query: 186 SLRSNSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           SLRSN+L G V E +  C SL  LD GSN FT  APF ++GL N++YFN+S+N
Sbjct: 224 SLRSNALSGSVEEHISGCHSLMHLDFGSNRFTDFAPFSILGLQNLTYFNISYN 276



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/111 (32%), Positives = 55/111 (49%)
 Frame = +3

Query: 12  FKNCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSL 191
           F N      + L + NL   IP  I NC  L+  D S NNL G  P  +  + N+  + +
Sbjct: 358 FGNIELLELLDLNNLNLIGEIPADITNCKFLLELDVSGNNLDGEIPLSVYKMTNLEALDM 417

Query: 192 RSNSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
             N L G +   +     ++FLDL  N F+G  P  +  L N+++F++SFN
Sbjct: 418 HHNQLKGSIPSSLGNLSRIQFLDLSHNSFSGSIPPSLGDLNNLTHFDLSFN 468



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
 Frame = +3

Query: 27  KTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSLRSNSL 206
           + R ++L  N  S +IP    +  +L   +FS N LSGS P  +  +PN+ F+ L  N  
Sbjct: 98  RLRILTLFGNRFSGNIPDDYADLHSLWKINFSSNALSGSIPDFMGDLPNIRFLDLSKNGF 157

Query: 207 VGDVREQVL-VCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
            G++   +   C   +F+ L  N   G  P  ++  +N+  F+ SFN
Sbjct: 158 NGEIPSALFRYCYKTKFVSLSHNNLVGSIPVSLVNCSNLEGFDFSFN 204


>ref|XP_003516680.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g12460-like [Glycine max]
          Length = 886

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/113 (58%), Positives = 88/113 (77%)
 Frame = +3

Query: 6   ALFKNCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFV 185
           ALF+ C+KT+F+SL+HNNL+ SIP S+ NC NL GFDFSFNNLSG  P ++CGIP +++V
Sbjct: 161 ALFRYCYKTKFVSLSHNNLAGSIPASLVNCSNLEGFDFSFNNLSGVVPPRLCGIPRLSYV 220

Query: 186 SLRSNSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
           SLR+N+L G V+E +  CQSL  LD GSN FT  APF V+ + N++Y N+S+N
Sbjct: 221 SLRNNALSGSVQELISTCQSLVHLDFGSNRFTDFAPFRVLEMQNLTYLNLSYN 273



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/111 (31%), Positives = 55/111 (49%)
 Frame = +3

Query: 12  FKNCFKTRFISLAHNNLSSSIPISIGNCLNLMGFDFSFNNLSGSFPSQICGIPNMAFVSL 191
           F N      + L + NL   IP  I NC  L+G D S N L G  P  +  + N+  ++L
Sbjct: 355 FGNVELLELLDLHNLNLVGQIPDDISNCKFLLGLDVSGNKLEGEIPQTLYNLTNLESLNL 414

Query: 192 RSNSLVGDVREQVLVCQSLEFLDLGSNFFTGLAPFDVIGLTNMSYFNVSFN 344
             N L G +   +     +++LDL  N  +G  P  +  L N+++F++SFN
Sbjct: 415 HHNQLNGSIPPSLGNLSRIQYLDLSHNSLSGPIPPSLGNLNNLTHFDLSFN 465


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