BLASTX nr result

ID: Coptis23_contig00028455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028455
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               166   2e-39
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   154   7e-36
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   154   7e-36
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]   145   4e-33
emb|CAN63175.1| hypothetical protein VITISV_027195 [Vitis vinifera]   144   6e-33

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/124 (65%), Positives = 95/124 (76%)
 Frame = -1

Query: 378  KRARVAKDLGPDFYTFTLEGDPXXXXXXXXXXXSDFWREAIQDEMDSLISNKTWELVDLP 199
            KRARV KD GPDFY F +  D            S FW+EA+ DEM+SLISNKTW+LVDLP
Sbjct: 763  KRARVEKDFGPDFYVFNVGDDRLTLKEALSSHDSIFWKEAVNDEMESLISNKTWKLVDLP 822

Query: 198  PGFKTIRNKWVLKRKLKPDGSVEKYKARLVAKGFGQKENIDFFDTYSPVTRITSIRLLFV 19
            PG KTI  KWVL++KLKPDGS++KYKARLVAKGF Q E ++FFDT+SPVTRITSIRLL  
Sbjct: 823  PGCKTIGCKWVLRKKLKPDGSIDKYKARLVAKGFKQLEGLEFFDTFSPVTRITSIRLLIA 882

Query: 18   VAVV 7
            +A +
Sbjct: 883  MAAI 886


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/126 (55%), Positives = 89/126 (70%)
 Frame = -1

Query: 378 KRARVAKDLGPDFYTFTLEGDPXXXXXXXXXXXSDFWREAIQDEMDSLISNKTWELVDLP 199
           KR R  K  GPDF TF LEG+P              W+EAI+ E+DS++ N TWELVDLP
Sbjct: 576 KRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLP 635

Query: 198 PGFKTIRNKWVLKRKLKPDGSVEKYKARLVAKGFGQKENIDFFDTYSPVTRITSIRLLFV 19
           PG K + +KW+ KRK+K DGS++KYKARLV KG+ Q E +D+FDTYSPVTRI SIR++  
Sbjct: 636 PGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLA 695

Query: 18  VAVVRN 1
           +A +RN
Sbjct: 696 IAALRN 701


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/126 (55%), Positives = 89/126 (70%)
 Frame = -1

Query: 378  KRARVAKDLGPDFYTFTLEGDPXXXXXXXXXXXSDFWREAIQDEMDSLISNKTWELVDLP 199
            KR R  K  GPDF TF LEG+P              W+EAI+ E+DS++ N TWELVDLP
Sbjct: 793  KRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLP 852

Query: 198  PGFKTIRNKWVLKRKLKPDGSVEKYKARLVAKGFGQKENIDFFDTYSPVTRITSIRLLFV 19
            PG K + +KW+ KRK+K DGS++KYKARLV KG+ Q E +D+FDTYSPVTRI SIR++  
Sbjct: 853  PGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLA 912

Query: 18   VAVVRN 1
            +A +RN
Sbjct: 913  IAALRN 918


>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
          Length = 1096

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/126 (53%), Positives = 91/126 (72%)
 Frame = -1

Query: 378 KRARVAKDLGPDFYTFTLEGDPXXXXXXXXXXXSDFWREAIQDEMDSLISNKTWELVDLP 199
           K+ R   +LG  FYTF ++ +P           + FW+EAI  E++S++ N TWELV+LP
Sbjct: 584 KKDRKETNLGDGFYTFLIDDNPRSYKEVITSLDASFWKEAINSEIESIMCNHTWELVNLP 643

Query: 198 PGFKTIRNKWVLKRKLKPDGSVEKYKARLVAKGFGQKENIDFFDTYSPVTRITSIRLLFV 19
           PG KTI  KW+ KRKLK DGS+EKYKARLVAKGF Q++++D+FDT++PVTRI SIR+L  
Sbjct: 644 PGAKTIGCKWIFKRKLKQDGSIEKYKARLVAKGFKQRKDVDYFDTFAPVTRIASIRVLIA 703

Query: 18  VAVVRN 1
           +A + N
Sbjct: 704 LASIHN 709


>emb|CAN63175.1| hypothetical protein VITISV_027195 [Vitis vinifera]
          Length = 338

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/126 (52%), Positives = 89/126 (70%)
 Frame = -1

Query: 378 KRARVAKDLGPDFYTFTLEGDPXXXXXXXXXXXSDFWREAIQDEMDSLISNKTWELVDLP 199
           KRA+  K  G D+ T+ L+ +P           + FW+EAI +E++S++ N TW+L+DLP
Sbjct: 69  KRAKKTKSFGLDYLTYMLDNEPKTFKEAMSTPEAPFWKEAINNEIESIMHNHTWKLMDLP 128

Query: 198 PGFKTIRNKWVLKRKLKPDGSVEKYKARLVAKGFGQKENIDFFDTYSPVTRITSIRLLFV 19
           PG K +  KW+ K+K+KPDG+++KYKARLVAKGF QKE +DFFDTYSPVTRITSIR L  
Sbjct: 129 PGNKPLGCKWIFKKKMKPDGTIDKYKARLVAKGFKQKEGLDFFDTYSPVTRITSIRXLIA 188

Query: 18  VAVVRN 1
              + N
Sbjct: 189 RTTLHN 194


Top