BLASTX nr result

ID: Coptis23_contig00028452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028452
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268050.1| PREDICTED: glutaredoxin-C13 [Vitis vinifera]      157   1e-36
ref|NP_182309.1| glutaredoxin-C13 [Arabidopsis thaliana] gi|2977...   155   2e-36
ref|XP_003625870.1| Glutaredoxin [Medicago truncatula] gi|355500...   152   3e-35
ref|XP_002320646.1| glutaredoxin [Populus trichocarpa] gi|222861...   152   3e-35
ref|NP_180612.1| monothiol glutaredoxin-S9 [Arabidopsis thaliana...   152   4e-35

>ref|XP_002268050.1| PREDICTED: glutaredoxin-C13 [Vitis vinifera]
          Length = 102

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/101 (72%), Positives = 86/101 (85%)
 Frame = -2

Query: 331 MDSVRRLSSGKGVVIFSKSTCCMCYTVKVLFNELCVNPMVHELDQNPEGKEIEKALIRLG 152
           MD V RL+S KGVVIFSKS+CC+CY V +LF EL V P VHE+DQ+P+G+E+EKAL+RLG
Sbjct: 1   MDKVTRLASEKGVVIFSKSSCCLCYAVNILFQELGVTPTVHEIDQDPDGREMEKALLRLG 60

Query: 151 CSTAVPAVFIGGTLIGSTNEVMSLHLGGSLVPLLKPYQTTL 29
           C+  VPAVFIGG L+GSTNEVMS HL GSL+PLLKPYQ TL
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEVMSRHLSGSLIPLLKPYQQTL 101


>ref|NP_182309.1| glutaredoxin-C13 [Arabidopsis thaliana]
           gi|297790318|ref|XP_002863058.1| glutaredoxin family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297824893|ref|XP_002880329.1| glutaredoxin family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|75100580|sp|O82255.1|GRC13_ARATH RecName:
           Full=Glutaredoxin-C13; Short=AtGrxC13; AltName:
           Full=Protein ROXY 9 gi|3738300|gb|AAC63642.1| putative
           glutaredoxin [Arabidopsis thaliana]
           gi|20197557|gb|AAM15127.1| putative glutaredoxin
           [Arabidopsis thaliana] gi|21554200|gb|AAM63279.1|
           putative glutaredoxin [Arabidopsis thaliana]
           gi|62320234|dbj|BAD94488.1| putative glutaredoxin
           [Arabidopsis thaliana] gi|90962952|gb|ABE02400.1|
           At2g47880 [Arabidopsis thaliana]
           gi|226348196|gb|ACO50414.1| glutaredoxin [Arabidopsis
           thaliana] gi|297308864|gb|EFH39317.1| glutaredoxin
           family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326168|gb|EFH56588.1| glutaredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|330255810|gb|AEC10904.1| glutaredoxin-C13
           [Arabidopsis thaliana]
          Length = 102

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/101 (70%), Positives = 88/101 (87%)
 Frame = -2

Query: 331 MDSVRRLSSGKGVVIFSKSTCCMCYTVKVLFNELCVNPMVHELDQNPEGKEIEKALIRLG 152
           MD V R+SS KGVVIF+KS+CC+CY V++LF +L V P +HE+D +P+ +EIEKAL+RLG
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRLG 60

Query: 151 CSTAVPAVFIGGTLIGSTNEVMSLHLGGSLVPLLKPYQTTL 29
           CSTAVPAVF+GG L+GSTNEVMSLHL GSLVPL+KPYQ+ L
Sbjct: 61  CSTAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSIL 101


>ref|XP_003625870.1| Glutaredoxin [Medicago truncatula] gi|355500885|gb|AES82088.1|
           Glutaredoxin [Medicago truncatula]
          Length = 102

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/99 (69%), Positives = 85/99 (85%)
 Frame = -2

Query: 331 MDSVRRLSSGKGVVIFSKSTCCMCYTVKVLFNELCVNPMVHELDQNPEGKEIEKALIRLG 152
           MD V RL+S KGVVIF+KS+CC+CY V +LF EL + PMVHE+DQ+PEG+E+EKAL+RLG
Sbjct: 1   MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGIRPMVHEIDQDPEGREMEKALLRLG 60

Query: 151 CSTAVPAVFIGGTLIGSTNEVMSLHLGGSLVPLLKPYQT 35
           C+  VPAVFIGG L+GSTNE+MSLHL GSL  L+KPYQ+
Sbjct: 61  CTAPVPAVFIGGQLMGSTNEIMSLHLSGSLTQLIKPYQS 99


>ref|XP_002320646.1| glutaredoxin [Populus trichocarpa] gi|222861419|gb|EEE98961.1|
           glutaredoxin [Populus trichocarpa]
          Length = 99

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/98 (71%), Positives = 86/98 (87%)
 Frame = -2

Query: 331 MDSVRRLSSGKGVVIFSKSTCCMCYTVKVLFNELCVNPMVHELDQNPEGKEIEKALIRLG 152
           MD V  L+S KGVVIFSKS+CC+CY VK+LF E+ V+P+V+E+DQ+PEG+E+EKAL RLG
Sbjct: 1   MDKVMGLASEKGVVIFSKSSCCLCYAVKILFQEIGVDPLVYEIDQDPEGREMEKALTRLG 60

Query: 151 CSTAVPAVFIGGTLIGSTNEVMSLHLGGSLVPLLKPYQ 38
           C+  VPAVFIGG L+GSTNEVMSLHL GSL+P+LKPYQ
Sbjct: 61  CNAPVPAVFIGGKLMGSTNEVMSLHLSGSLIPMLKPYQ 98


>ref|NP_180612.1| monothiol glutaredoxin-S9 [Arabidopsis thaliana]
           gi|75317810|sp|O04341.1|GRXS9_ARATH RecName:
           Full=Monothiol glutaredoxin-S9; Short=AtGrxS9; AltName:
           Full=Protein ROXY 7 gi|1946365|gb|AAB63083.1| putative
           glutaredoxin [Arabidopsis thaliana]
           gi|21593494|gb|AAM65461.1| putative glutaredoxin
           [Arabidopsis thaliana] gi|22022556|gb|AAM83235.1|
           At2g30540/T6B20.11 [Arabidopsis thaliana]
           gi|24111317|gb|AAN46782.1| At2g30540/T6B20.11
           [Arabidopsis thaliana] gi|226348192|gb|ACO50412.1|
           glutaredoxin [Arabidopsis thaliana]
           gi|330253311|gb|AEC08405.1| monothiol glutaredoxin-S9
           [Arabidopsis thaliana]
          Length = 102

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/101 (72%), Positives = 87/101 (86%)
 Frame = -2

Query: 331 MDSVRRLSSGKGVVIFSKSTCCMCYTVKVLFNELCVNPMVHELDQNPEGKEIEKALIRLG 152
           MD V R+SS KGVVIFSKS+CCM Y V+VLF +L V+P VHE+D++PE +EIEKAL+RLG
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLG 60

Query: 151 CSTAVPAVFIGGTLIGSTNEVMSLHLGGSLVPLLKPYQTTL 29
           CST VPA+F+GG LIGSTNEVMSLHL GSLVPL+KP+Q  L
Sbjct: 61  CSTPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQANL 101


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