BLASTX nr result

ID: Coptis23_contig00028451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028451
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]    96   2e-18
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]    87   1e-15
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]    87   1e-15
ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002309902.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14

>emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]
          Length = 579

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/78 (55%), Positives = 56/78 (71%)
 Frame = -1

Query: 234 LLYCKDLALPIENGGVRPEKTEVVEWNKLDRKAIGYIRQWIDDSVFHHVSQETTAFSLWK 55
           +LYCK+L  PIE  G +P  T   EW KL+RK +G IRQW+D SVFHHV++E  A+SLW+
Sbjct: 26  ILYCKELFEPIECRGYKPITTIEDEWKKLNRKTVGXIRQWVDQSVFHHVAKEVDAYSLWQ 85

Query: 54  KLEDLYERKSGGNKVLVV 1
           KLE LYERK+   K  ++
Sbjct: 86  KLESLYERKTTQXKAFII 103


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = -1

Query: 234 LLYCKDLALPIENGGVRPEKTEVVEWNKLDRKAIGYIRQWIDDSVFHHVSQETTAFSLWK 55
           LLY KD   P+     RPE     EWN L R+  GYIRQW+DD+V +HVS+E  A SLW 
Sbjct: 4   LLYVKDYYXPVF-ASERPENKXDAEWNLLHRQVCGYIRQWVDDNVLNHVSEEKHARSLWN 62

Query: 54  KLEDLYERKSGGNKVLVV 1
           KLE LY RK+G NK+L++
Sbjct: 63  KLEQLYARKTGNNKLLLI 80


>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
          Length = 1204

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/78 (53%), Positives = 52/78 (66%)
 Frame = -1

Query: 234 LLYCKDLALPIENGGVRPEKTEVVEWNKLDRKAIGYIRQWIDDSVFHHVSQETTAFSLWK 55
           LLY KD  LP+     RPE     EWN L R+  GYIRQW+DD+V +HVS+E  A SLW 
Sbjct: 4   LLYMKDYYLPVF-ASERPENKTDAEWNLLHRQVCGYIRQWVDDNVLNHVSKEKHARSLWN 62

Query: 54  KLEDLYERKSGGNKVLVV 1
           KLE LY RK+G NK+ ++
Sbjct: 63  KLEQLYARKTGNNKLFLI 80


>ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 33/77 (42%), Positives = 51/77 (66%)
 Frame = -1

Query: 231 LYCKDLALPIENGGVRPEKTEVVEWNKLDRKAIGYIRQWIDDSVFHHVSQETTAFSLWKK 52
           LYC DL LPIE  G++P+  +  +WN L+RKA   +R+W+     +H+SQE   +++WK 
Sbjct: 27  LYCNDLDLPIECKGIKPDDMDDAKWNGLNRKATANVRKWVSSKSINHISQEHDCYTIWKM 86

Query: 51  LEDLYERKSGGNKVLVV 1
           LE+ + +KS  NKV V+
Sbjct: 87  LEETFAKKSAQNKVFVI 103


>ref|XP_002309902.1| predicted protein [Populus trichocarpa] gi|222852805|gb|EEE90352.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 33/77 (42%), Positives = 52/77 (67%)
 Frame = -1

Query: 231 LYCKDLALPIENGGVRPEKTEVVEWNKLDRKAIGYIRQWIDDSVFHHVSQETTAFSLWKK 52
           LYC DLALPIE  G++P+  +  +WN L+RKA   +R+W+     +H+SQE   +++WK 
Sbjct: 27  LYCNDLALPIECKGIKPDDMDDAKWNGLNRKATANVRKWVSSKSINHISQEHDCYTVWKL 86

Query: 51  LEDLYERKSGGNKVLVV 1
           LE+ + ++S  NKV V+
Sbjct: 87  LEETFAKESAQNKVFVI 103


Top