BLASTX nr result

ID: Coptis23_contig00028419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028419
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83359.1| hypothetical protein VITISV_015659 [Vitis vinifera]   376   e-102
emb|CBI16676.3| unnamed protein product [Vitis vinifera]              375   e-101
ref|XP_002303379.1| predicted protein [Populus trichocarpa] gi|2...   362   8e-98
ref|XP_002270672.1| PREDICTED: uncharacterized protein LOC100261...   361   2e-97
ref|XP_002329607.1| predicted protein [Populus trichocarpa] gi|2...   358   1e-96

>emb|CAN83359.1| hypothetical protein VITISV_015659 [Vitis vinifera]
          Length = 984

 Score =  376 bits (966), Expect = e-102
 Identities = 188/265 (70%), Positives = 216/265 (81%), Gaps = 1/265 (0%)
 Frame = +2

Query: 2    YKSQGADGSGITSTKDGTSTRTPSAERLREPRPYSSRKELNRLVQEAMGNPDTKEVRIPA 181
            ++SQGADGSGITSTKD TSTRTPSAERLREP P   RKEL  L Q AM  P+   + IPA
Sbjct: 697  FRSQGADGSGITSTKDVTSTRTPSAERLREPLPSLGRKELISLAQHAMQGPNQDAINIPA 756

Query: 182  SQRKRVAAPLGKVDSKL-YLTPMPLLYRGAAVSGAGLLKNNADVKHKREGPCVGTKGFRA 358
            SQRKRVAAP GKVD K+ YL+PMPL   G AV+GAGL+++  D KHK+EGPCVGTKGFRA
Sbjct: 757  SQRKRVAAP-GKVDEKIVYLSPMPLHSMGVAVTGAGLMRSKGDGKHKKEGPCVGTKGFRA 815

Query: 359  PEVLLKSQHQGSKVDVWSAGVTLLYLIIGRAPFTGDPEQNMKDIAKLKGSEDLWEVAKLH 538
            PEVL +S HQGSKVD+WSAGVTLLYL++GR+PF GDP+QN+KDI KL+GSEDLWEVAKLH
Sbjct: 816  PEVLFRSLHQGSKVDIWSAGVTLLYLMVGRSPFVGDPKQNIKDIMKLRGSEDLWEVAKLH 875

Query: 539  NRESSLPEELFDIKSLPAKNLRGWCEMYTKRLDFLDSIPSSLFDLIEKCLIVNPRLRISA 718
            NRESS P ELFDI+ LP+  L+ WC++ TKR +F   IP SLFDL++KCL VNPRLRISA
Sbjct: 876  NRESSFPVELFDIQFLPSVELKHWCKLNTKRPEFFKLIPRSLFDLVDKCLTVNPRLRISA 935

Query: 719  EEALRHVFFTRCHEDLRKTRLLSLG 793
            EEALRH FF  CHE LRK R+L  G
Sbjct: 936  EEALRHEFFAPCHESLRKQRMLRQG 960


>emb|CBI16676.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  375 bits (963), Expect = e-101
 Identities = 187/265 (70%), Positives = 216/265 (81%), Gaps = 1/265 (0%)
 Frame = +2

Query: 2    YKSQGADGSGITSTKDGTSTRTPSAERLREPRPYSSRKELNRLVQEAMGNPDTKEVRIPA 181
            ++SQGADGSGITSTKD TSTRTPSAERLREP P   RKEL  L Q AM  P+   + IPA
Sbjct: 229  FRSQGADGSGITSTKDVTSTRTPSAERLREPLPSLGRKELISLAQHAMQGPNQDAINIPA 288

Query: 182  SQRKRVAAPLGKVDSKL-YLTPMPLLYRGAAVSGAGLLKNNADVKHKREGPCVGTKGFRA 358
            SQRKRVAAP GKVD K+ YL+PMPL   G AV+GAGL+++  D KHK+EGPCVGTKGFRA
Sbjct: 289  SQRKRVAAP-GKVDEKIVYLSPMPLHSMGVAVTGAGLMRSKGDGKHKKEGPCVGTKGFRA 347

Query: 359  PEVLLKSQHQGSKVDVWSAGVTLLYLIIGRAPFTGDPEQNMKDIAKLKGSEDLWEVAKLH 538
            PEVL +S HQGSKVD+WSAGVTLLYL++GR+PF GDP+QN+KDI KL+GSEDLWEVAKLH
Sbjct: 348  PEVLFRSLHQGSKVDIWSAGVTLLYLMVGRSPFVGDPKQNIKDIMKLRGSEDLWEVAKLH 407

Query: 539  NRESSLPEELFDIKSLPAKNLRGWCEMYTKRLDFLDSIPSSLFDLIEKCLIVNPRLRISA 718
            NRESS P ELFDI+ LP+  L+ WC++ TKR +F   IP SLFDL++KCL VNPRLRISA
Sbjct: 408  NRESSFPVELFDIQFLPSVELKHWCKLNTKRPEFFKLIPRSLFDLVDKCLTVNPRLRISA 467

Query: 719  EEALRHVFFTRCHEDLRKTRLLSLG 793
            EEALRH FF  CHE L+K R+L  G
Sbjct: 468  EEALRHEFFAPCHESLKKQRMLRQG 492


>ref|XP_002303379.1| predicted protein [Populus trichocarpa] gi|222840811|gb|EEE78358.1|
            predicted protein [Populus trichocarpa]
          Length = 467

 Score =  362 bits (929), Expect = 8e-98
 Identities = 177/291 (60%), Positives = 224/291 (76%), Gaps = 7/291 (2%)
 Frame = +2

Query: 5    KSQGADGSGITSTKDGTSTRTPSAERLREPRPYSSRKELNRLVQEAMGNPDTKEVRIPAS 184
            KSQGADGSG+TS KD TS RTPSAERL+EP P   RKEL  L+ EAM +P+ +   +PAS
Sbjct: 176  KSQGADGSGVTSVKDATSARTPSAERLKEPLPCQGRKELISLLHEAMQSPNHEASSVPAS 235

Query: 185  QRKRVAAPLGKVDSK-LYLTPMPLLYRGAAVSGAGLLKNNADVKHKREGPCVGTKGFRAP 361
             RKR+AAP GK+D + +YLTPMPL      V+G GL+KN  D K+K+EGPCVGTKGFRAP
Sbjct: 236  MRKRIAAPPGKIDGRHIYLTPMPLHSTDITVAGIGLVKNKGDGKNKKEGPCVGTKGFRAP 295

Query: 362  EVLLKSQHQGSKVDVWSAGVTLLYLIIGRAPFTGDPEQNMKDIAKLKGSEDLWEVAKLHN 541
            EVL +S +QG KVD+WSAGVTLLYLIIG+ PF GDPEQN+KDIAKL+GSEDLWE++KLH+
Sbjct: 296  EVLFRSLYQGPKVDIWSAGVTLLYLIIGKTPFYGDPEQNIKDIAKLRGSEDLWEISKLHD 355

Query: 542  RESSLPEELFDIKSLPAKNLRGWCEMYTKRLDFLDSIPSSLFDLIEKCLIVNPRLRISAE 721
            RESS P +L++++SLP   L  WC++ +KR DFLD++PSSL DL++KCL VNPRLRISAE
Sbjct: 356  RESSFPVDLYNMQSLPPTTLWEWCKLNSKRQDFLDAVPSSLIDLVDKCLTVNPRLRISAE 415

Query: 722  EALRHVFFTRCHEDLRKTRLLSLGFGTDHHSD------ETLSSEMKVLHRQ 856
            +AL+H FF  CHE LRK +LL  G   D  ++      ++++  +K+  RQ
Sbjct: 416  DALKHEFFAPCHESLRKQKLLRQGLSLDSRTNNIPSHGQSIARPIKIYQRQ 466


>ref|XP_002270672.1| PREDICTED: uncharacterized protein LOC100261519 [Vitis vinifera]
          Length = 976

 Score =  361 bits (926), Expect = 2e-97
 Identities = 184/265 (69%), Positives = 210/265 (79%), Gaps = 1/265 (0%)
 Frame = +2

Query: 2    YKSQGADGSGITSTKDGTSTRTPSAERLREPRPYSSRKELNRLVQEAMGNPDTKEVRIPA 181
            ++SQGADGSGITSTKD TSTRTPSAERLREP P   RKEL  L Q AM  P+   + IPA
Sbjct: 697  FRSQGADGSGITSTKDVTSTRTPSAERLREPLPSLGRKELISLAQHAMQGPNQDAINIPA 756

Query: 182  SQRKRVAAPLGKVDSKL-YLTPMPLLYRGAAVSGAGLLKNNADVKHKREGPCVGTKGFRA 358
            SQRKRVAAP GKVD K+ YL+PMPL   G AV+G G        KHK+EGPCVGTKGFRA
Sbjct: 757  SQRKRVAAP-GKVDEKIVYLSPMPLHSMGVAVTGDG--------KHKKEGPCVGTKGFRA 807

Query: 359  PEVLLKSQHQGSKVDVWSAGVTLLYLIIGRAPFTGDPEQNMKDIAKLKGSEDLWEVAKLH 538
            PEVL +S HQGSKVD+WSAGVTLLYL++GR+PF GDP+QN+KDI KL+GSEDLWEVAKLH
Sbjct: 808  PEVLFRSLHQGSKVDIWSAGVTLLYLMVGRSPFVGDPKQNIKDIMKLRGSEDLWEVAKLH 867

Query: 539  NRESSLPEELFDIKSLPAKNLRGWCEMYTKRLDFLDSIPSSLFDLIEKCLIVNPRLRISA 718
            NRESS P ELFDI+ LP+  L+ WC++ TKR +F   IP SLFDL++KCL VNPRLRISA
Sbjct: 868  NRESSFPVELFDIQFLPSVELKHWCKLNTKRPEFFKLIPRSLFDLVDKCLTVNPRLRISA 927

Query: 719  EEALRHVFFTRCHEDLRKTRLLSLG 793
            EEALRH FF  CHE L+K R+L  G
Sbjct: 928  EEALRHEFFAPCHESLKKQRMLRQG 952


>ref|XP_002329607.1| predicted protein [Populus trichocarpa] gi|222870316|gb|EEF07447.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  358 bits (919), Expect = 1e-96
 Identities = 176/291 (60%), Positives = 223/291 (76%), Gaps = 7/291 (2%)
 Frame = +2

Query: 5   KSQGADGSGITSTKDGTSTRTPSAERLREPRPYSSRKELNRLVQEAMGNPDTKEVRIPAS 184
           KSQGADGSG+TS KD TS RTPSAERL+EP P   RKEL  L+ EAM +P+ +   + AS
Sbjct: 55  KSQGADGSGVTSVKDATSARTPSAERLKEPLPCQGRKELISLLHEAMQSPNHEASSVLAS 114

Query: 185 QRKRVAAPLGKVDSK-LYLTPMPLLYRGAAVSGAGLLKNNADVKHKREGPCVGTKGFRAP 361
            RKR+AAP GK+D + +YLTPMPL      V+G GL+KN  D K+K+EGPCVGTKGFRAP
Sbjct: 115 MRKRIAAPPGKIDGRHIYLTPMPLHSTDITVAGIGLVKNKGDGKNKKEGPCVGTKGFRAP 174

Query: 362 EVLLKSQHQGSKVDVWSAGVTLLYLIIGRAPFTGDPEQNMKDIAKLKGSEDLWEVAKLHN 541
           EVL +S +QG KVD+WSAGVTLLYLIIG+ PF GDPEQN+KDIAKL+GSEDLWE++KLH+
Sbjct: 175 EVLFRSLYQGPKVDIWSAGVTLLYLIIGKTPFYGDPEQNIKDIAKLRGSEDLWEISKLHD 234

Query: 542 RESSLPEELFDIKSLPAKNLRGWCEMYTKRLDFLDSIPSSLFDLIEKCLIVNPRLRISAE 721
           RESS P +L++++SLP   L  WC++ +KR DFLD++PSSL DL++KCL VNPRLRISAE
Sbjct: 235 RESSFPVDLYNMQSLPPTTLWEWCKLNSKRQDFLDAVPSSLIDLVDKCLTVNPRLRISAE 294

Query: 722 EALRHVFFTRCHEDLRKTRLLSLGFGTDHHSD------ETLSSEMKVLHRQ 856
           +AL+H FF  CHE LRK +LL  G   D  ++      ++++  +K+  RQ
Sbjct: 295 DALKHEFFAPCHESLRKQKLLRQGLSLDSRTNNIPSHGQSIARPIKIYQRQ 345


Top