BLASTX nr result
ID: Coptis23_contig00028418
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028418 (317 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|2... 84 1e-14 ref|XP_002518251.1| conserved hypothetical protein [Ricinus comm... 79 5e-13 ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like... 78 7e-13 ref|XP_004154786.1| PREDICTED: uncharacterized protein LOC101223... 73 2e-11 ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218... 73 2e-11 >ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|222853559|gb|EEE91106.1| predicted protein [Populus trichocarpa] Length = 533 Score = 84.0 bits (206), Expect = 1e-14 Identities = 36/49 (73%), Positives = 40/49 (81%) Frame = +1 Query: 1 RYDHPLLIEGRDKSEWVLPITVHVPPPRTQTAQTRNKKSLSSVPIWVRT 147 RY+HPLLIEGRDKSEWVLPITVH PPPR A +RN+K S P+WVRT Sbjct: 485 RYEHPLLIEGRDKSEWVLPITVHAPPPRASAAHSRNEKGFSLEPLWVRT 533 >ref|XP_002518251.1| conserved hypothetical protein [Ricinus communis] gi|223542598|gb|EEF44137.1| conserved hypothetical protein [Ricinus communis] Length = 528 Score = 78.6 bits (192), Expect = 5e-13 Identities = 34/49 (69%), Positives = 38/49 (77%) Frame = +1 Query: 1 RYDHPLLIEGRDKSEWVLPITVHVPPPRTQTAQTRNKKSLSSVPIWVRT 147 RY+HPLL+EGRDKSEWVLPITVH PPP A TR+ K S P+WVRT Sbjct: 480 RYEHPLLVEGRDKSEWVLPITVHAPPPGALAAHTRDAKHFSLEPLWVRT 528 >ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi transport protein RGP1-like protein [Medicago truncatula] Length = 529 Score = 78.2 bits (191), Expect = 7e-13 Identities = 33/49 (67%), Positives = 41/49 (83%) Frame = +1 Query: 1 RYDHPLLIEGRDKSEWVLPITVHVPPPRTQTAQTRNKKSLSSVPIWVRT 147 +Y+HPLLIEGR+K+EWVLPITVH PPPRT T+ +RN+K S P+WV T Sbjct: 481 KYEHPLLIEGREKTEWVLPITVHAPPPRTPTSGSRNEKLFSLDPMWVHT 529 >ref|XP_004154786.1| PREDICTED: uncharacterized protein LOC101223298 [Cucumis sativus] Length = 427 Score = 73.2 bits (178), Expect = 2e-11 Identities = 31/49 (63%), Positives = 37/49 (75%) Frame = +1 Query: 1 RYDHPLLIEGRDKSEWVLPITVHVPPPRTQTAQTRNKKSLSSVPIWVRT 147 RY+HPLLIEGR+KSEWVLPITVH PP TAQ RN + S P+W+ + Sbjct: 379 RYEHPLLIEGREKSEWVLPITVHAPPSSAATAQNRNDRPFSLEPLWMHS 427 >ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218523 [Cucumis sativus] Length = 538 Score = 73.2 bits (178), Expect = 2e-11 Identities = 31/49 (63%), Positives = 37/49 (75%) Frame = +1 Query: 1 RYDHPLLIEGRDKSEWVLPITVHVPPPRTQTAQTRNKKSLSSVPIWVRT 147 RY+HPLLIEGR+KSEWVLPITVH PP TAQ RN + S P+W+ + Sbjct: 490 RYEHPLLIEGREKSEWVLPITVHAPPSSAATAQNRNDRPFSLEPLWMHS 538