BLASTX nr result
ID: Coptis23_contig00028416
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028416 (593 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN80559.1| hypothetical protein VITISV_002775 [Vitis vinifera] 225 4e-57 ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera] 225 5e-57 emb|CBI20929.3| unnamed protein product [Vitis vinifera] 225 5e-57 ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|2... 216 2e-54 emb|CAN63857.1| hypothetical protein VITISV_017610 [Vitis vinifera] 216 2e-54 >emb|CAN80559.1| hypothetical protein VITISV_002775 [Vitis vinifera] Length = 554 Score = 225 bits (574), Expect = 4e-57 Identities = 115/198 (58%), Positives = 146/198 (73%), Gaps = 2/198 (1%) Frame = +1 Query: 4 ESDKMGIVESQEVMISVKKEENLPVQNVKNSITVRNVADTQPWKQASEKSAEDLVLSNKD 183 E+ + VE+Q+ + V EE+ +Q+ +S+ +VAD ++ S K A+ +LS ++ Sbjct: 228 ETSNIRTVETQDSTLLVNLEEDEFIQHTFSSJRTSDVADPTQLEETSIKPAQHQILSEEE 287 Query: 184 LDNF--SENLEGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRD 357 DN ++ GP I +IDSDH+DP MCSLYA DIY N EL RRP++NFM+++QRD Sbjct: 288 EDNLFKAQGSPNGPCIADIDSDHKDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQRD 347 Query: 358 ITQTMRGILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIAS 537 IT MRGIL+DWLVEV+EEYKL DTLYLTV LIDRFLS NYI +Q+LQLLG+TCMLIAS Sbjct: 348 ITPNMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKNYIEKQRLQLLGVTCMLIAS 407 Query: 538 KYEEICAPRVEEFCFITD 591 KYEEICAP VEEFCFITD Sbjct: 408 KYEEICAPHVEEFCFITD 425 >ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera] Length = 533 Score = 225 bits (573), Expect = 5e-57 Identities = 115/198 (58%), Positives = 146/198 (73%), Gaps = 2/198 (1%) Frame = +1 Query: 4 ESDKMGIVESQEVMISVKKEENLPVQNVKNSITVRNVADTQPWKQASEKSAEDLVLSNKD 183 E+ + VE+Q+ + V EE+ +Q+ +S+ +VAD ++ S K A+ +LS ++ Sbjct: 178 ETSNIRTVETQDSTLLVNLEEDEFIQHTFSSLRTSDVADPTQLEETSIKPAQHQILSEEE 237 Query: 184 LDNF--SENLEGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRD 357 DN ++ GP I +IDSDH+DP MCSLYA DIY N EL RRP++NFM+++QRD Sbjct: 238 EDNLFKAQGSPNGPCIADIDSDHKDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQRD 297 Query: 358 ITQTMRGILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIAS 537 IT MRGIL+DWLVEV+EEYKL DTLYLTV LIDRFLS NYI +Q+LQLLG+TCMLIAS Sbjct: 298 ITPNMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKNYIEKQRLQLLGVTCMLIAS 357 Query: 538 KYEEICAPRVEEFCFITD 591 KYEEICAP VEEFCFITD Sbjct: 358 KYEEICAPHVEEFCFITD 375 >emb|CBI20929.3| unnamed protein product [Vitis vinifera] Length = 401 Score = 225 bits (573), Expect = 5e-57 Identities = 115/198 (58%), Positives = 146/198 (73%), Gaps = 2/198 (1%) Frame = +1 Query: 4 ESDKMGIVESQEVMISVKKEENLPVQNVKNSITVRNVADTQPWKQASEKSAEDLVLSNKD 183 E+ + VE+Q+ + V EE+ +Q+ +S+ +VAD ++ S K A+ +LS ++ Sbjct: 46 ETSNIRTVETQDSTLLVNLEEDEFIQHTFSSLRTSDVADPTQLEETSIKPAQHQILSEEE 105 Query: 184 LDNF--SENLEGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRD 357 DN ++ GP I +IDSDH+DP MCSLYA DIY N EL RRP++NFM+++QRD Sbjct: 106 EDNLFKAQGSPNGPCIADIDSDHKDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQRD 165 Query: 358 ITQTMRGILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIAS 537 IT MRGIL+DWLVEV+EEYKL DTLYLTV LIDRFLS NYI +Q+LQLLG+TCMLIAS Sbjct: 166 ITPNMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKNYIEKQRLQLLGVTCMLIAS 225 Query: 538 KYEEICAPRVEEFCFITD 591 KYEEICAP VEEFCFITD Sbjct: 226 KYEEICAPHVEEFCFITD 243 >ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|222845390|gb|EEE82937.1| predicted protein [Populus trichocarpa] Length = 482 Score = 216 bits (551), Expect = 2e-54 Identities = 117/191 (61%), Positives = 139/191 (72%), Gaps = 2/191 (1%) Frame = +1 Query: 25 VESQEVMISVKKEENLPVQNVKNSITVRNVADTQPWKQASEKSAEDLVLSNKDLDNFSEN 204 V E++ S +E+++ Q + I + D Q Q S + K+ N SEN Sbjct: 138 VPYSEIVCSSTQEKDVSSQ--PSGIRGVGIDDPQLPNQCSRVPSHPHNSPKKEKCNVSEN 195 Query: 205 --LEGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRDITQTMRG 378 + + I+IDS+H+DP +CSLYA DIY NLRVAEL+RR NFMET+QRDITQ+MRG Sbjct: 196 QKISRDQEFIDIDSNHKDPQLCSLYAADIYSNLRVAELVRRSLPNFMETVQRDITQSMRG 255 Query: 379 ILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIASKYEEICA 558 ILIDWLVEV+EEYKL DTLYLTVYLIDRFLS NYI RQ+LQLLGITCMLIASKYEEIC+ Sbjct: 256 ILIDWLVEVSEEYKLVPDTLYLTVYLIDRFLSQNYIERQRLQLLGITCMLIASKYEEICS 315 Query: 559 PRVEEFCFITD 591 PRVEEFCFITD Sbjct: 316 PRVEEFCFITD 326 >emb|CAN63857.1| hypothetical protein VITISV_017610 [Vitis vinifera] Length = 872 Score = 216 bits (550), Expect = 2e-54 Identities = 122/197 (61%), Positives = 146/197 (74%), Gaps = 8/197 (4%) Frame = +1 Query: 25 VESQEV---MISVKKEENLPVQNVKNSITVR--NVADTQPWKQASEKSAEDLVLSNK-DL 186 VE QE+ +I + + NLP Q + + T+R +AD Q K SE +++ SN+ + Sbjct: 139 VEKQEIEPEVICLTIDGNLPSQ-LTSXTTLRXCGIADNQVEKHCSEIASQLHSSSNEAEK 197 Query: 187 DNFSENL--EGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRDI 360 +F L P + +IDSD +DP +CSLYAP+IY NL VAEL RRP SNFMET+QRDI Sbjct: 198 GSFDGKLTTSSNPDVKDIDSDDKDPQLCSLYAPEIYNNLHVAELNRRPCSNFMETVQRDI 257 Query: 361 TQTMRGILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIASK 540 TQ+MRGIL+DWLVEV+EEYKL DTLYLTV+LID FLS NYI RQKLQLLGITCMLIASK Sbjct: 258 TQSMRGILVDWLVEVSEEYKLVPDTLYLTVHLIDWFLSQNYIERQKLQLLGITCMLIASK 317 Query: 541 YEEICAPRVEEFCFITD 591 YEEICAPRVEEFC ITD Sbjct: 318 YEEICAPRVEEFCCITD 334