BLASTX nr result

ID: Coptis23_contig00028416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028416
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80559.1| hypothetical protein VITISV_002775 [Vitis vinifera]   225   4e-57
ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera]      225   5e-57
emb|CBI20929.3| unnamed protein product [Vitis vinifera]              225   5e-57
ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
emb|CAN63857.1| hypothetical protein VITISV_017610 [Vitis vinifera]   216   2e-54

>emb|CAN80559.1| hypothetical protein VITISV_002775 [Vitis vinifera]
          Length = 554

 Score =  225 bits (574), Expect = 4e-57
 Identities = 115/198 (58%), Positives = 146/198 (73%), Gaps = 2/198 (1%)
 Frame = +1

Query: 4   ESDKMGIVESQEVMISVKKEENLPVQNVKNSITVRNVADTQPWKQASEKSAEDLVLSNKD 183
           E+  +  VE+Q+  + V  EE+  +Q+  +S+   +VAD    ++ S K A+  +LS ++
Sbjct: 228 ETSNIRTVETQDSTLLVNLEEDEFIQHTFSSJRTSDVADPTQLEETSIKPAQHQILSEEE 287

Query: 184 LDNF--SENLEGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRD 357
            DN   ++    GP I +IDSDH+DP MCSLYA DIY N    EL RRP++NFM+++QRD
Sbjct: 288 EDNLFKAQGSPNGPCIADIDSDHKDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQRD 347

Query: 358 ITQTMRGILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIAS 537
           IT  MRGIL+DWLVEV+EEYKL  DTLYLTV LIDRFLS NYI +Q+LQLLG+TCMLIAS
Sbjct: 348 ITPNMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKNYIEKQRLQLLGVTCMLIAS 407

Query: 538 KYEEICAPRVEEFCFITD 591
           KYEEICAP VEEFCFITD
Sbjct: 408 KYEEICAPHVEEFCFITD 425


>ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera]
          Length = 533

 Score =  225 bits (573), Expect = 5e-57
 Identities = 115/198 (58%), Positives = 146/198 (73%), Gaps = 2/198 (1%)
 Frame = +1

Query: 4   ESDKMGIVESQEVMISVKKEENLPVQNVKNSITVRNVADTQPWKQASEKSAEDLVLSNKD 183
           E+  +  VE+Q+  + V  EE+  +Q+  +S+   +VAD    ++ S K A+  +LS ++
Sbjct: 178 ETSNIRTVETQDSTLLVNLEEDEFIQHTFSSLRTSDVADPTQLEETSIKPAQHQILSEEE 237

Query: 184 LDNF--SENLEGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRD 357
            DN   ++    GP I +IDSDH+DP MCSLYA DIY N    EL RRP++NFM+++QRD
Sbjct: 238 EDNLFKAQGSPNGPCIADIDSDHKDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQRD 297

Query: 358 ITQTMRGILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIAS 537
           IT  MRGIL+DWLVEV+EEYKL  DTLYLTV LIDRFLS NYI +Q+LQLLG+TCMLIAS
Sbjct: 298 ITPNMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKNYIEKQRLQLLGVTCMLIAS 357

Query: 538 KYEEICAPRVEEFCFITD 591
           KYEEICAP VEEFCFITD
Sbjct: 358 KYEEICAPHVEEFCFITD 375


>emb|CBI20929.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  225 bits (573), Expect = 5e-57
 Identities = 115/198 (58%), Positives = 146/198 (73%), Gaps = 2/198 (1%)
 Frame = +1

Query: 4   ESDKMGIVESQEVMISVKKEENLPVQNVKNSITVRNVADTQPWKQASEKSAEDLVLSNKD 183
           E+  +  VE+Q+  + V  EE+  +Q+  +S+   +VAD    ++ S K A+  +LS ++
Sbjct: 46  ETSNIRTVETQDSTLLVNLEEDEFIQHTFSSLRTSDVADPTQLEETSIKPAQHQILSEEE 105

Query: 184 LDNF--SENLEGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRD 357
            DN   ++    GP I +IDSDH+DP MCSLYA DIY N    EL RRP++NFM+++QRD
Sbjct: 106 EDNLFKAQGSPNGPCIADIDSDHKDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQRD 165

Query: 358 ITQTMRGILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIAS 537
           IT  MRGIL+DWLVEV+EEYKL  DTLYLTV LIDRFLS NYI +Q+LQLLG+TCMLIAS
Sbjct: 166 ITPNMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKNYIEKQRLQLLGVTCMLIAS 225

Query: 538 KYEEICAPRVEEFCFITD 591
           KYEEICAP VEEFCFITD
Sbjct: 226 KYEEICAPHVEEFCFITD 243


>ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|222845390|gb|EEE82937.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  216 bits (551), Expect = 2e-54
 Identities = 117/191 (61%), Positives = 139/191 (72%), Gaps = 2/191 (1%)
 Frame = +1

Query: 25  VESQEVMISVKKEENLPVQNVKNSITVRNVADTQPWKQASEKSAEDLVLSNKDLDNFSEN 204
           V   E++ S  +E+++  Q   + I    + D Q   Q S   +       K+  N SEN
Sbjct: 138 VPYSEIVCSSTQEKDVSSQ--PSGIRGVGIDDPQLPNQCSRVPSHPHNSPKKEKCNVSEN 195

Query: 205 --LEGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRDITQTMRG 378
             +    + I+IDS+H+DP +CSLYA DIY NLRVAEL+RR   NFMET+QRDITQ+MRG
Sbjct: 196 QKISRDQEFIDIDSNHKDPQLCSLYAADIYSNLRVAELVRRSLPNFMETVQRDITQSMRG 255

Query: 379 ILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIASKYEEICA 558
           ILIDWLVEV+EEYKL  DTLYLTVYLIDRFLS NYI RQ+LQLLGITCMLIASKYEEIC+
Sbjct: 256 ILIDWLVEVSEEYKLVPDTLYLTVYLIDRFLSQNYIERQRLQLLGITCMLIASKYEEICS 315

Query: 559 PRVEEFCFITD 591
           PRVEEFCFITD
Sbjct: 316 PRVEEFCFITD 326


>emb|CAN63857.1| hypothetical protein VITISV_017610 [Vitis vinifera]
          Length = 872

 Score =  216 bits (550), Expect = 2e-54
 Identities = 122/197 (61%), Positives = 146/197 (74%), Gaps = 8/197 (4%)
 Frame = +1

Query: 25  VESQEV---MISVKKEENLPVQNVKNSITVR--NVADTQPWKQASEKSAEDLVLSNK-DL 186
           VE QE+   +I +  + NLP Q + +  T+R   +AD Q  K  SE +++    SN+ + 
Sbjct: 139 VEKQEIEPEVICLTIDGNLPSQ-LTSXTTLRXCGIADNQVEKHCSEIASQLHSSSNEAEK 197

Query: 187 DNFSENL--EGGPKIINIDSDHQDPLMCSLYAPDIYKNLRVAELIRRPTSNFMETMQRDI 360
            +F   L     P + +IDSD +DP +CSLYAP+IY NL VAEL RRP SNFMET+QRDI
Sbjct: 198 GSFDGKLTTSSNPDVKDIDSDDKDPQLCSLYAPEIYNNLHVAELNRRPCSNFMETVQRDI 257

Query: 361 TQTMRGILIDWLVEVTEEYKLTSDTLYLTVYLIDRFLSHNYIVRQKLQLLGITCMLIASK 540
           TQ+MRGIL+DWLVEV+EEYKL  DTLYLTV+LID FLS NYI RQKLQLLGITCMLIASK
Sbjct: 258 TQSMRGILVDWLVEVSEEYKLVPDTLYLTVHLIDWFLSQNYIERQKLQLLGITCMLIASK 317

Query: 541 YEEICAPRVEEFCFITD 591
           YEEICAPRVEEFC ITD
Sbjct: 318 YEEICAPRVEEFCCITD 334


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