BLASTX nr result

ID: Coptis23_contig00028411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028411
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof...   157   7e-37
ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isof...   157   7e-37
emb|CBI24276.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vit...   157   1e-36
emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]   157   1e-36

>ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus]
          Length = 368

 Score =  157 bits (398), Expect = 7e-37
 Identities = 70/98 (71%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
 Frame = -1

Query: 291 WPLSWIRSKL-DNHSKPMSPLPVDSIMSRYISFESGKFWFPAQVYNREHGHVGFMLSCYD 115
           W LSWIRSK+ +N + P + LPVDSIM+ Y++ E+G+FWFPAQVYNRE+GHVGFMLSCYD
Sbjct: 148 WSLSWIRSKVNENSNTPRTFLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYD 207

Query: 114 AELCYDRRTDTFRASYPPHGRRTIVTEEGVEWDRLRAP 1
           AELCYD RTDTF+A YPPHGRR I  E GV+W+RLR+P
Sbjct: 208 AELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSP 245


>ref|XP_004140188.1| PREDICTED: F-box protein At2g32560-like isoform 1 [Cucumis sativus]
          Length = 396

 Score =  157 bits (398), Expect = 7e-37
 Identities = 70/98 (71%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
 Frame = -1

Query: 291 WPLSWIRSKL-DNHSKPMSPLPVDSIMSRYISFESGKFWFPAQVYNREHGHVGFMLSCYD 115
           W LSWIRSK+ +N + P + LPVDSIM+ Y++ E+G+FWFPAQVYNRE+GHVGFMLSCYD
Sbjct: 176 WSLSWIRSKVNENSNTPRTFLPVDSIMAWYLALETGRFWFPAQVYNRENGHVGFMLSCYD 235

Query: 114 AELCYDRRTDTFRASYPPHGRRTIVTEEGVEWDRLRAP 1
           AELCYD RTDTF+A YPPHGRR I  E GV+W+RLR+P
Sbjct: 236 AELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSP 273


>emb|CBI24276.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  157 bits (396), Expect = 1e-36
 Identities = 70/96 (72%), Positives = 79/96 (82%)
 Frame = -1

Query: 288 PLSWIRSKLDNHSKPMSPLPVDSIMSRYISFESGKFWFPAQVYNREHGHVGFMLSCYDAE 109
           PLSWIRS+L N +   S +PVDSIMS Y++ E+G+FWFPAQVYNRE GHVGFMLSCYDAE
Sbjct: 157 PLSWIRSRLSNSTPQRSSVPVDSIMSWYLALETGRFWFPAQVYNRESGHVGFMLSCYDAE 216

Query: 108 LCYDRRTDTFRASYPPHGRRTIVTEEGVEWDRLRAP 1
           L YD  TDTF+A YPPHGRRT+  E GV WDRLRAP
Sbjct: 217 LSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAP 252


>ref|XP_002263423.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera]
          Length = 396

 Score =  157 bits (396), Expect = 1e-36
 Identities = 70/96 (72%), Positives = 79/96 (82%)
 Frame = -1

Query: 288 PLSWIRSKLDNHSKPMSPLPVDSIMSRYISFESGKFWFPAQVYNREHGHVGFMLSCYDAE 109
           PLSWIRS+L N +   S +PVDSIMS Y++ E+G+FWFPAQVYNRE GHVGFMLSCYDAE
Sbjct: 178 PLSWIRSRLSNSTPQRSSVPVDSIMSWYLALETGRFWFPAQVYNRESGHVGFMLSCYDAE 237

Query: 108 LCYDRRTDTFRASYPPHGRRTIVTEEGVEWDRLRAP 1
           L YD  TDTF+A YPPHGRRT+  E GV WDRLRAP
Sbjct: 238 LSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAP 273


>emb|CAN78683.1| hypothetical protein VITISV_043889 [Vitis vinifera]
          Length = 364

 Score =  157 bits (396), Expect = 1e-36
 Identities = 70/96 (72%), Positives = 79/96 (82%)
 Frame = -1

Query: 288 PLSWIRSKLDNHSKPMSPLPVDSIMSRYISFESGKFWFPAQVYNREHGHVGFMLSCYDAE 109
           PLSWIRS+L N +   S +PVDSIMS Y++ E+G+FWFPAQVYNRE GHVGFMLSCYDAE
Sbjct: 113 PLSWIRSRLSNSTPQRSSVPVDSIMSWYLALETGRFWFPAQVYNRESGHVGFMLSCYDAE 172

Query: 108 LCYDRRTDTFRASYPPHGRRTIVTEEGVEWDRLRAP 1
           L YD  TDTF+A YPPHGRRT+  E GV WDRLRAP
Sbjct: 173 LSYDSHTDTFQARYPPHGRRTVAIENGVSWDRLRAP 208


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