BLASTX nr result

ID: Coptis23_contig00028383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028383
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26057.3| unnamed protein product [Vitis vinifera]              184   4e-44
ref|XP_002332253.1| predicted protein [Populus trichocarpa] gi|2...   173   6e-41
ref|XP_003609675.1| hypothetical protein MTR_4g119920 [Medicago ...   151   3e-34
ref|NP_193317.6| uncharacterized protein [Arabidopsis thaliana] ...   139   1e-30
ref|XP_002870207.1| hypothetical protein ARALYDRAFT_493302 [Arab...   138   3e-30

>emb|CBI26057.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  184 bits (467), Expect = 4e-44
 Identities = 117/304 (38%), Positives = 159/304 (52%), Gaps = 28/304 (9%)
 Frame = +3

Query: 6    KFKSDSSKPRNSPKGFPGVKNHSVRDGNDRSSGSQDSEFRKDIIKNSARGMSVNLPNGGS 185
            KF++ SS PRN PKGF  ++N  +      SS + D+               V+LP G S
Sbjct: 360  KFRNASSMPRNDPKGFQPLENSDISKKKKSSSSTVDT--------------IVDLPAGNS 405

Query: 186  HGSTHENEVKTLLKLARKDEEKSCGTKLVSTGKSLKKVEGMKTEKR----------NSRS 335
                 +N+  +L        E+ CG   +S   S  +  G K EK           N   
Sbjct: 406  Q----QNDSSSL--------EEDCGRNALSKESSSLQNHGKKLEKGREGKKMGGIVNPEF 453

Query: 336  GVVRESKEELVEPRDSNKMKTKSSPIPKTN-------------VRFKEVVDSARDKQEYI 476
            G V+    E       +  K   + + K N             V  K+V   +RDK   I
Sbjct: 454  GNVKRRSSERETKNSQSLTKENQNTVTKPNADLSRNGSSNCRKVGSKQVAKGSRDKSSDI 513

Query: 477  ENDAWWLSLPYALAILLRRNSESDGPGGLYSLKM-----DDGSPSYIVAFEDQRDASNFC 641
            + D WWL LP  +A+L++R S  +  GGLY+LK      D    SY VAFED+ DA+NFC
Sbjct: 514  KADLWWLHLPCVIAVLMQRGSNHEEQGGLYTLKTTSHESDPIDSSYTVAFEDRGDATNFC 573

Query: 642  YILEAFFDELGDLKADVVPLSIKELRDEVETMTMKIIVLRKGQLQLYAGQPLVDVEMTLR 821
            Y+LE+FF+ELGD  AD+VPLSIKEL + V++  MK+IV++KGQLQLYAGQPL DVEM +R
Sbjct: 574  YLLESFFEELGDFSADIVPLSIKELHEAVKSDGMKVIVVKKGQLQLYAGQPLADVEMAMR 633

Query: 822  TLVK 833
            +LV+
Sbjct: 634  SLVE 637


>ref|XP_002332253.1| predicted protein [Populus trichocarpa] gi|222832018|gb|EEE70495.1|
            predicted protein [Populus trichocarpa]
          Length = 561

 Score =  173 bits (439), Expect = 6e-41
 Identities = 107/292 (36%), Positives = 160/292 (54%), Gaps = 15/292 (5%)
 Frame = +3

Query: 6    KFKSDSSKPRNSPKGFPGVKNHSVRDGNDRSSGSQDSEFRKDIIKNSARGMSVNLPNGGS 185
            +FKS S   R++PKGF G+K+ S  + +D +  S+ ++ R            +    GG 
Sbjct: 284  RFKSPSMDARSAPKGFSGLKDDSGSNISDLNGVSRKTDVRY-----------LKKDTGGK 332

Query: 186  HGSTHENEVKTL-----LKLARKDEEKSCGT-KLVSTGKSLKKV----EGMKTEKRNSRS 335
            HG+   N VK        K A   +E   GT + +  G+S  +V    +    E  NS S
Sbjct: 333  HGNVQLNSVKNEGNKFEKKRANLRKEMGSGTVQKIREGRSSNEVPDAGKSRDLETLNSES 392

Query: 336  GVVRESKEELVEPRDSNKMKTKSSPIPKTNVRFKEVVDSARDKQEYIENDAWWLSLPYAL 515
                  +  +   R +       S  P      + + +   DKQ  ++ D WW +LPY L
Sbjct: 393  STKENQETTIKVERPAATSSRNGSRDPGK----RPLANKFGDKQSDVQKDLWWSNLPYVL 448

Query: 516  AILLRRNSESDGPGGLYSLKM-----DDGSPSYIVAFEDQRDASNFCYILEAFFDELGDL 680
            AIL+RR SE +  GGLY+L++       G  SY +AFED+ DA+NFCY+LE+FF++LGD 
Sbjct: 449  AILMRRGSEHEESGGLYALRVASQADQHGDFSYTIAFEDRGDANNFCYLLESFFEDLGDF 508

Query: 681  KADVVPLSIKELRDEVETMTMKIIVLRKGQLQLYAGQPLVDVEMTLRTLVKQ 836
             AD+VPL IKEL D V++ + K+IV+++GQL+LYAGQP  +VE  L +L++Q
Sbjct: 509  SADIVPLQIKELHDAVKSHSKKVIVVKRGQLKLYAGQPFSEVETALYSLLEQ 560


>ref|XP_003609675.1| hypothetical protein MTR_4g119920 [Medicago truncatula]
            gi|355510730|gb|AES91872.1| hypothetical protein
            MTR_4g119920 [Medicago truncatula]
          Length = 564

 Score =  151 bits (381), Expect = 3e-34
 Identities = 96/293 (32%), Positives = 155/293 (52%), Gaps = 16/293 (5%)
 Frame = +3

Query: 6    KFKSDSSKPRNSPKGFPGVKNHSVRDGNDRSSGSQDSEFRKDIIKNSARGMSVNLPNGGS 185
            KFKS S+K   +PKGFPG ++  V     +  GSQ ++ R  I+    +    ++ +  +
Sbjct: 268  KFKSPSTKATRTPKGFPGTQDRRVSSVKPQDYGSQVTD-RAGILDGDKQVNQQDVTDKNA 326

Query: 186  HGSTHENEVKTLLKLARKDEEKSCGTKLVSTGKSLKKVEGMKTEKRNSRS---GVVRESK 356
             G   E   KT+   + + + +    + +    + K  +G+  +  N+ +     +  S 
Sbjct: 327  SGVPLEERGKTVDDKSGEIQNEGKNLEEMIEAPNTKTKDGVTPKSINNGAFPETSIGMSS 386

Query: 357  EELVEPRDSNKMKTKSSPIPKTN-------VRFKEVVDSARDKQEYIENDAWWLSLPYAL 515
             E+ E R  N    +   +   N        +     + A+ KQE  + D WWL+L Y L
Sbjct: 387  PEVRELRTQNTQGFEKDNVDSINGSSGHGLAKKNSAANKAKVKQEKSKTDIWWLNLRYVL 446

Query: 516  AILLRRNSESDGPGGLYSLKM-----DDGSPSYIVAFEDQRDASNFCYILEAFFDELGD- 677
             IL++R S  +G  GLYSL       +    SY VAFED  DA+NFC++LE++F++LGD 
Sbjct: 447  VILMQRGSNGEGHKGLYSLNFTSKEREQNDDSYTVAFEDPADANNFCFLLESYFEDLGDN 506

Query: 678  LKADVVPLSIKELRDEVETMTMKIIVLRKGQLQLYAGQPLVDVEMTLRTLVKQ 836
              A+ VP+SI+EL +E+     K++V++K QLQLYAGQ L DVEM L ++++Q
Sbjct: 507  FSANAVPMSIQELNEEIIFHGEKVVVVKKRQLQLYAGQLLTDVEMALCSIIEQ 559


>ref|NP_193317.6| uncharacterized protein [Arabidopsis thaliana]
           gi|332658256|gb|AEE83656.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 460

 Score =  139 bits (350), Expect = 1e-30
 Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 6/284 (2%)
 Frame = +3

Query: 3   FKFKSDSSKPRNSPKGFPGVK-NHSVRDGNDRSSGSQDSEFRKDIIKNSARGMSVNLPNG 179
           +KFK++   P  + KGF G K +  +  G +++  +  +   +D  KN    +  ++   
Sbjct: 210 YKFKAEKP-PMGNVKGFGGSKGSDEIMSGTEKTGKNGSASESRDGEKNPEEQLQESVFRD 268

Query: 180 GSHGSTHENEVKTLLKLARKDEEKSCGTKLVSTGKSLKKVEGMKTEKRNSRSGVVRESKE 359
           G+   + +      +K +RK   +  GT  +  G       G  +   + + G VR+ K 
Sbjct: 269 GAAQESEQRRPSNEVKKSRKSGNRVGGTPNMKAGS------GFGSTSLSEKHGDVRKGK- 321

Query: 360 ELVEPRDSNKMKTKSSPIPKTNVRFKEVVDSARDKQEYIENDAWWLSLPYALAILLRRNS 539
                           P+ +           A++KQ   EN  WWL LPY L IL+R N 
Sbjct: 322 ----------------PLRR-----------AKEKQSEKENKLWWLKLPYVLRILMRSNI 354

Query: 540 ESDGPGGLYSLKMD-----DGSPSYIVAFEDQRDASNFCYILEAFFDELGDLKADVVPLS 704
           + D   G ++L+ +     +G  S+++AFEDQ DA NF Y+LE+ F++L D  AD+ P++
Sbjct: 355 DQDISEGYFTLRTESMEQNEGQVSHMIAFEDQSDARNFSYLLESVFEDLDDFSADIAPVT 414

Query: 705 IKELRDEVETMTMKIIVLRKGQLQLYAGQPLVDVEMTLRTLVKQ 836
            K+L DEV +    +IV+RK QL LYAGQP  DVE  LRTL+++
Sbjct: 415 TKDLYDEVSSGGKNVIVVRKRQLTLYAGQPFEDVERALRTLIQE 458


>ref|XP_002870207.1| hypothetical protein ARALYDRAFT_493302 [Arabidopsis lyrata subsp.
           lyrata] gi|297316043|gb|EFH46466.1| hypothetical protein
           ARALYDRAFT_493302 [Arabidopsis lyrata subsp. lyrata]
          Length = 475

 Score =  138 bits (347), Expect = 3e-30
 Identities = 95/285 (33%), Positives = 141/285 (49%), Gaps = 7/285 (2%)
 Frame = +3

Query: 3   FKFKSDSSKPRNSPKGFPGVK-NHSVRDGNDRSSGSQD-SEFRKDIIKNSARGMSVNLPN 176
           +KFK++   P  + KGF G K N  V  G + +  + + SE R    +    G+S +   
Sbjct: 224 YKFKAEKP-PTGNVKGFGGSKGNDEVISGTEMTGQNGNVSESRDPEEQQIEAGLSDSEMV 282

Query: 177 GGSHGSTHENEVKTLLKLARKDEEKSCGTKLVSTGKSLKKVEGMKTEKRNSRSGVVRESK 356
            G+   +        +K +RK   +  GT+ +  G       G  +   + + G VR+ K
Sbjct: 283 SGAAQESELRRPSNEIKKSRKSGNRVGGTQNMVAGS------GFGSTSLSGKHGEVRKGK 336

Query: 357 EELVEPRDSNKMKTKSSPIPKTNVRFKEVVDSARDKQEYIENDAWWLSLPYALAILLRRN 536
                                        +  AR+KQ   EN  WWL LPY L IL+R N
Sbjct: 337 P----------------------------MRRAREKQSEKENKMWWLKLPYVLRILMRSN 368

Query: 537 SESDGPGGLYSLKMD-----DGSPSYIVAFEDQRDASNFCYILEAFFDELGDLKADVVPL 701
            + D   G ++L+ +     +G  SY++AFEDQ DA NF Y+LE+ F++L D  AD+ P+
Sbjct: 369 IDQDISEGFFTLRTESMEQNEGQVSYMIAFEDQSDARNFSYLLESVFEDLDDFIADIAPV 428

Query: 702 SIKELRDEVETMTMKIIVLRKGQLQLYAGQPLVDVEMTLRTLVKQ 836
           S K+L DEV +    +IV+RK QL LYAGQP  DVE  LRTL+++
Sbjct: 429 STKDLYDEVSSGDKNVIVVRKRQLTLYAGQPFEDVERALRTLIQE 473


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