BLASTX nr result

ID: Coptis23_contig00028381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028381
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33346.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis ...    89   1e-15
emb|CAN78491.1| hypothetical protein VITISV_004934 [Vitis vinifera]    89   1e-15
ref|XP_003622996.1| Pectate lyase 1-27 [Medicago truncatula] gi|...    85   2e-14
ref|XP_004134015.1| PREDICTED: probable pectate lyase 15-like [C...    82   1e-13

>emb|CBI33346.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 44/75 (58%), Positives = 46/75 (61%)
 Frame = -1

Query: 790 KEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYFVPXXXXXXXXXXXXXXXXXXXXXXXXSI 611
           KEVTKRVDT  GQWKGWNWRSEGD+LLNGAYF P                        SI
Sbjct: 356 KEVTKRVDTPSGQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSSSMVGSI 415

Query: 610 TSGAGVLSCRRGNQC 566
           TS AG LSCRRG+QC
Sbjct: 416 TSNAGALSCRRGSQC 430


>ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis vinifera]
          Length = 432

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 44/75 (58%), Positives = 46/75 (61%)
 Frame = -1

Query: 790 KEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYFVPXXXXXXXXXXXXXXXXXXXXXXXXSI 611
           KEVTKRVDT  GQWKGWNWRSEGD+LLNGAYF P                        SI
Sbjct: 358 KEVTKRVDTPSGQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSSSMVGSI 417

Query: 610 TSGAGVLSCRRGNQC 566
           TS AG LSCRRG+QC
Sbjct: 418 TSNAGALSCRRGSQC 432


>emb|CAN78491.1| hypothetical protein VITISV_004934 [Vitis vinifera]
          Length = 418

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 44/75 (58%), Positives = 46/75 (61%)
 Frame = -1

Query: 790 KEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYFVPXXXXXXXXXXXXXXXXXXXXXXXXSI 611
           KEVTKRVDT  GQWKGWNWRSEGD+LLNGAYF P                        SI
Sbjct: 344 KEVTKRVDTPSGQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSSSMVGSI 403

Query: 610 TSGAGVLSCRRGNQC 566
           TS AG LSCRRG+QC
Sbjct: 404 TSNAGALSCRRGSQC 418


>ref|XP_003622996.1| Pectate lyase 1-27 [Medicago truncatula]
           gi|355498011|gb|AES79214.1| Pectate lyase 1-27 [Medicago
           truncatula]
          Length = 444

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 39/75 (52%), Positives = 45/75 (60%)
 Frame = -1

Query: 790 KEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYFVPXXXXXXXXXXXXXXXXXXXXXXXXSI 611
           KEVTKRVDTG G WKGWNWRSEGD+LLNGA+F P                        ++
Sbjct: 370 KEVTKRVDTGSGIWKGWNWRSEGDLLLNGAFFTPSGRGAAASYARASSLGAKPSSLVGTL 429

Query: 610 TSGAGVLSCRRGNQC 566
           T+GAGV+ CRRG  C
Sbjct: 430 TAGAGVIKCRRGGMC 444


>ref|XP_004134015.1| PREDICTED: probable pectate lyase 15-like [Cucumis sativus]
           gi|449487510|ref|XP_004157662.1| PREDICTED: probable
           pectate lyase 15-like [Cucumis sativus]
          Length = 447

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 38/75 (50%), Positives = 45/75 (60%)
 Frame = -1

Query: 790 KEVTKRVDTGVGQWKGWNWRSEGDMLLNGAYFVPXXXXXXXXXXXXXXXXXXXXXXXXSI 611
           KEVTKRV+T   +WKGWNWRSEGD+LLNGA+F+P                        +I
Sbjct: 373 KEVTKRVETSESEWKGWNWRSEGDLLLNGAFFIPSGAGASSSYARASSLGAKSSSMVGTI 432

Query: 610 TSGAGVLSCRRGNQC 566
           TS AG LSCRRG+ C
Sbjct: 433 TSNAGALSCRRGHAC 447


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