BLASTX nr result

ID: Coptis23_contig00028375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028375
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318944.1| predicted protein [Populus trichocarpa] gi|1...   136   2e-30
ref|XP_002281765.1| PREDICTED: uncharacterized protein LOC100257...   133   2e-29
emb|CAN64719.1| hypothetical protein VITISV_026720 [Vitis vinifera]   133   2e-29
ref|XP_002330030.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|NP_001236106.1| uncharacterized protein LOC100306511 [Glycin...   130   1e-28

>ref|XP_002318944.1| predicted protein [Populus trichocarpa] gi|118483456|gb|ABK93627.1|
           unknown [Populus trichocarpa]
           gi|222857320|gb|EEE94867.1| predicted protein [Populus
           trichocarpa]
          Length = 117

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/115 (60%), Positives = 80/115 (69%), Gaps = 5/115 (4%)
 Frame = +2

Query: 17  MAMAWKQILSN-----QTTKQHPFLFLGPSRFFSKTTSQYVEKVGIPEFLNGVGKGVETH 181
           MAMAW+QI++N         Q      G SRFFSK++S+Y+ KVGIPEFLNG+GKGVE H
Sbjct: 1   MAMAWRQIITNTKRAVSIPTQQAISTPGFSRFFSKSSSRYIVKVGIPEFLNGIGKGVEAH 60

Query: 182 VVKLETEIGDFNXXXXXXXXXXXXXGIPCKHRKLILKYTHKYRLGLWRPRAESVK 346
           V KLE+EIGDF+             GIPC+ RKLILKY HKYRLGLWRPRAE VK
Sbjct: 61  VAKLESEIGDFHKLLVTRTLKLKKLGIPCQQRKLILKYAHKYRLGLWRPRAEPVK 115


>ref|XP_002281765.1| PREDICTED: uncharacterized protein LOC100257949 [Vitis vinifera]
          Length = 108

 Score =  133 bits (335), Expect = 2e-29
 Identities = 68/108 (62%), Positives = 77/108 (71%)
 Frame = +2

Query: 23  MAWKQILSNQTTKQHPFLFLGPSRFFSKTTSQYVEKVGIPEFLNGVGKGVETHVVKLETE 202
           MAW+QI+SN+          G  RFFSK+T  Y+ KVGIPEFLNG+GKGVETHV KLETE
Sbjct: 1   MAWRQIISNRMGVSWQ---AGLPRFFSKSTP-YIVKVGIPEFLNGIGKGVETHVAKLETE 56

Query: 203 IGDFNXXXXXXXXXXXXXGIPCKHRKLILKYTHKYRLGLWRPRAESVK 346
           IGDF              GIPCKHRKLIL++THKYRLGLWRPRAE +K
Sbjct: 57  IGDFQKLLVTRTLRLKKLGIPCKHRKLILRHTHKYRLGLWRPRAEPIK 104


>emb|CAN64719.1| hypothetical protein VITISV_026720 [Vitis vinifera]
          Length = 108

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/108 (62%), Positives = 77/108 (71%)
 Frame = +2

Query: 23  MAWKQILSNQTTKQHPFLFLGPSRFFSKTTSQYVEKVGIPEFLNGVGKGVETHVVKLETE 202
           MAW+QI+SN+          G  RFFSK+T  Y+ KVGIPEFLNG+GKGVETHV KLETE
Sbjct: 1   MAWRQIISNRMGISWQ---AGLPRFFSKSTP-YIVKVGIPEFLNGIGKGVETHVAKLETE 56

Query: 203 IGDFNXXXXXXXXXXXXXGIPCKHRKLILKYTHKYRLGLWRPRAESVK 346
           IGDF              GIPCKHRKLIL++THKYRLGLWRPRAE +K
Sbjct: 57  IGDFQKLLVTRTLRLKKLGIPCKHRKLILRHTHKYRLGLWRPRAEPIK 104


>ref|XP_002330030.1| predicted protein [Populus trichocarpa] gi|222871455|gb|EEF08586.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  130 bits (328), Expect = 1e-28
 Identities = 66/115 (57%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
 Frame = +2

Query: 17  MAMAWKQILSN-----QTTKQHPFLFLGPSRFFSKTTSQYVEKVGIPEFLNGVGKGVETH 181
           MAMAW+QI +N         +      G SRFFSK++S Y+ KVGIPEFLNG+GKGVE H
Sbjct: 1   MAMAWRQIFTNTKRAFSIPPERAVSTPGLSRFFSKSSSPYLVKVGIPEFLNGIGKGVEAH 60

Query: 182 VVKLETEIGDFNXXXXXXXXXXXXXGIPCKHRKLILKYTHKYRLGLWRPRAESVK 346
           V KLE+EIGDF+             GIPC+ RKLILKY HKYR+GLWRPRA+ VK
Sbjct: 61  VTKLESEIGDFHKLLVTRTLKLKKLGIPCQQRKLILKYAHKYRVGLWRPRAQPVK 115


>ref|NP_001236106.1| uncharacterized protein LOC100306511 [Glycine max]
           gi|255628743|gb|ACU14716.1| unknown [Glycine max]
          Length = 110

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/109 (64%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
 Frame = +2

Query: 23  MAWKQILSNQTTKQHPFLF--LGPSRFFSKTTSQYVEKVGIPEFLNGVGKGVETHVVKLE 196
           MAW Q L    TK    L   L  SRFFSK++S YV KVGIPEFLNG+GKGVE+HV KLE
Sbjct: 1   MAWLQ-LQRIVTKGGANLISPLPLSRFFSKSSSPYVVKVGIPEFLNGIGKGVESHVPKLE 59

Query: 197 TEIGDFNXXXXXXXXXXXXXGIPCKHRKLILKYTHKYRLGLWRPRAESV 343
           +EIGDF              GIPCKHRKLILKYTHKYRLGLWRPR ES+
Sbjct: 60  SEIGDFQKLLLTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRVESI 108


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