BLASTX nr result

ID: Coptis23_contig00028371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028371
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA44478.1| ORF 873 [Helianthus annuus] gi|758363|emb|CAA376...    67   1e-09
emb|CBL52023.1| hypothetical protein (mitochondrion) [Beta vulga...    59   4e-07

>emb|CAA44478.1| ORF 873 [Helianthus annuus] gi|758363|emb|CAA37614.1| unnamed
           protein product [Helianthus annuus]
          Length = 291

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/92 (35%), Positives = 56/92 (60%)
 Frame = -2

Query: 289 EMDLFHRIRDLEAELAHGIPAQLNQGDYERQVREILADSVNHNHYLSNLSNELFEVDIMH 110
           E ++F RIR+LE +  + +P Q N G+YE  VRE    +++  HY + L  E FE+ ++ 
Sbjct: 132 EAEIFTRIRNLETQDYYNLPPQNNPGEYEVLVREEFEQALDVPHYRTVLDREYFELTVLE 191

Query: 109 KKVQIQNIIFDAILTEPNIDNLIRISPYPDIR 14
           +K  +Q+ +F  +L E  I  ++ +SPY +IR
Sbjct: 192 RKGLLQDRLFHLMLGEQKISRIMELSPYQNIR 223


>emb|CBL52023.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 170

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/78 (35%), Positives = 46/78 (58%)
 Frame = -2

Query: 289 EMDLFHRIRDLEAELAHGIPAQLNQGDYERQVREILADSVNHNHYLSNLSNELFEVDIMH 110
           E DL  RIR LE  +  GIP QL  G+YE  V+  L  S++  HY S L+ E F+++++ 
Sbjct: 16  EQDLIARIRVLENRMLPGIPPQLTDGEYEALVKSFLDHSLSIRHYESTLNTERFDLNVLE 75

Query: 109 KKVQIQNIIFDAILTEPN 56
           +K  +   ++  ++ EP+
Sbjct: 76  RKADLVEGLWRILINEPS 93


Top