BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028363
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                      106   2e-21
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...   106   2e-21
gb|AFN88207.1| integrase core domain containing protein [Phaseol...   104   6e-21
emb|CAN66301.1| hypothetical protein VITISV_029373 [Vitis vinifera]   104   8e-21
emb|CAN72951.1| hypothetical protein VITISV_020157 [Vitis vinifera]   100   9e-20

>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/81 (59%), Positives = 64/81 (79%)
 Frame = -2

Query: 245 FVLFIDDFSRCTWVYLMKSKDEVSSIFQSFTAMVRTQFGTTVKVFRSDQGGEFLSHGLRQ 66
           FVLFIDDF+R +WV L+KSKD V S F++F ++VRTQ+   VKVFRSD GGEF++H   +
Sbjct: 259 FVLFIDDFTRLSWVVLLKSKDSVFSAFRAFHSLVRTQYDAHVKVFRSDNGGEFVNHSFHE 318

Query: 65  FCEANGILHQTSNTQTPQQNG 3
           + + +GI+HQTS  QTP+QNG
Sbjct: 319 YFQHHGIIHQTSCPQTPEQNG 339


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/81 (58%), Positives = 61/81 (75%)
 Frame = -2

Query: 245 FVLFIDDFSRCTWVYLMKSKDEVSSIFQSFTAMVRTQFGTTVKVFRSDQGGEFLSHGLRQ 66
           FV F+DDFSRCTW+YL+KSKDEV ++FQ F ++V  QF T +KV RSD G E++S+   Q
Sbjct: 516 FVTFVDDFSRCTWLYLLKSKDEVINVFQEFHSLVTNQFSTQLKVLRSDNGTEYMSNAFAQ 575

Query: 65  FCEANGILHQTSNTQTPQQNG 3
           +   +GI+HQTS   TPQQNG
Sbjct: 576 YLTCHGIIHQTSCVGTPQQNG 596


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score =  104 bits (260), Expect = 6e-21
 Identities = 46/81 (56%), Positives = 61/81 (75%)
 Frame = -2

Query: 245 FVLFIDDFSRCTWVYLMKSKDEVSSIFQSFTAMVRTQFGTTVKVFRSDQGGEFLSHGLRQ 66
           FV FIDD+SRCTWV+LMK++ E+ SIFQ F   ++ QFG ++++ RSD G E+LSH  + 
Sbjct: 557 FVTFIDDYSRCTWVFLMKNRSELFSIFQLFYNEIKNQFGISIRILRSDNGREYLSHSFKN 616

Query: 65  FCEANGILHQTSNTQTPQQNG 3
           F  ++GILHQTS   TPQQNG
Sbjct: 617 FMASHGILHQTSCAYTPQQNG 637


>emb|CAN66301.1| hypothetical protein VITISV_029373 [Vitis vinifera]
          Length = 1041

 Score =  104 bits (259), Expect = 8e-21
 Identities = 45/81 (55%), Positives = 64/81 (79%)
 Frame = -2

Query: 245 FVLFIDDFSRCTWVYLMKSKDEVSSIFQSFTAMVRTQFGTTVKVFRSDQGGEFLSHGLRQ 66
           FV+F+DD +R TW+YL+K KDEV  +FQSF  MV+TQF T +K+ RSD GGE+++  ++ 
Sbjct: 275 FVIFVDDCTRMTWLYLLKHKDEVFVVFQSFHTMVQTQFSTKIKILRSDNGGEYVNQQIQT 334

Query: 65  FCEANGILHQTSNTQTPQQNG 3
           +  ++GILH+TS +QTPQQNG
Sbjct: 335 YFNSHGILHETSCSQTPQQNG 355


>emb|CAN72951.1| hypothetical protein VITISV_020157 [Vitis vinifera]
          Length = 644

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/81 (55%), Positives = 61/81 (75%)
 Frame = -2

Query: 245 FVLFIDDFSRCTWVYLMKSKDEVSSIFQSFTAMVRTQFGTTVKVFRSDQGGEFLSHGLRQ 66
           FV FIDD +R TW+YLMK+KDEV+ +FQ F  M+ TQ+   V+V RSD GGE+ S  L++
Sbjct: 251 FVTFIDDCTRMTWLYLMKTKDEVNLLFQKFHKMIETQYNEKVRVLRSDNGGEYQSSNLQK 310

Query: 65  FCEANGILHQTSNTQTPQQNG 3
           + E +GI+HQT+ + TPQQNG
Sbjct: 311 YLEGHGIIHQTTCSNTPQQNG 331