BLASTX nr result

ID: Coptis23_contig00028358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028358
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275584.1| PREDICTED: uncharacterized protein LOC100247...   336   3e-90
emb|CBI16633.3| unnamed protein product [Vitis vinifera]              322   7e-86
ref|XP_002302509.1| predicted protein [Populus trichocarpa] gi|2...   307   1e-81
ref|XP_003626721.1| hypothetical protein MTR_8g006290 [Medicago ...   306   3e-81
ref|XP_002511618.1| conserved hypothetical protein [Ricinus comm...   305   9e-81

>ref|XP_002275584.1| PREDICTED: uncharacterized protein LOC100247848 [Vitis vinifera]
          Length = 305

 Score =  336 bits (861), Expect = 3e-90
 Identities = 162/246 (65%), Positives = 197/246 (80%)
 Frame = -2

Query: 740 SSSSPIHIKMNPPTSSRVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFST 561
           S SS  ++ M+   S   QNV+VMRHGDR+DN EPLW +TA RPWDPPL D GKVRAF T
Sbjct: 32  SISSSRNLSMDSSDSQHFQNVVVMRHGDRLDNTEPLWVSTAARPWDPPLADPGKVRAFCT 91

Query: 560 GRKLRNNLGFPINRVIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKVS 381
           GRKLR+ LGFPI+RV+VSPF RC+QTASEV+SALCA++DD  V  +GD ++IDPSKLKVS
Sbjct: 92  GRKLRSQLGFPIHRVLVSPFLRCVQTASEVISALCAIDDDP-VNMTGDGVAIDPSKLKVS 150

Query: 380 VEFGLCEIISREAIRPDFAPKDGIWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEESLL 201
           +EFGLCE++SREAIR + APKDG WGF + ELEA  PAGTVDTT   +Y E+P++EE + 
Sbjct: 151 IEFGLCEMMSREAIRLELAPKDGNWGFNVSELEAMLPAGTVDTTVERVYQELPQYEEGVP 210

Query: 200 DARARYACVIHALADKFPSENLLLVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQIS 21
            +R RY  VI ALADKFPSENLLLVTHGEGVGV+ISAF KD  VYEV+YCA++H +R I 
Sbjct: 211 GSRIRYEKVIQALADKFPSENLLLVTHGEGVGVSISAFMKDATVYEVDYCAFSHSRRPIF 270

Query: 20  FNSDRA 3
           F ++ +
Sbjct: 271 FGNNES 276


>emb|CBI16633.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  322 bits (824), Expect = 7e-86
 Identities = 153/223 (68%), Positives = 184/223 (82%)
 Frame = -2

Query: 671 MRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINRVIVSPFTRC 492
           MRHGDR+DN EPLW +TA RPWDPPL D GKVRAF TGRKLR+ LGFPI+RV+VSPF RC
Sbjct: 1   MRHGDRLDNTEPLWVSTAARPWDPPLADPGKVRAFCTGRKLRSQLGFPIHRVLVSPFLRC 60

Query: 491 IQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKVSVEFGLCEIISREAIRPDFAPKDG 312
           +QTASEV+SALCA++DD  V  +GD ++IDPSKLKVS+EFGLCE++SREAIR + APKDG
Sbjct: 61  VQTASEVISALCAIDDDP-VNMTGDGVAIDPSKLKVSIEFGLCEMMSREAIRLELAPKDG 119

Query: 311 IWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEESLLDARARYACVIHALADKFPSENLL 132
            WGF + ELEA  PAGTVDTT   +Y E+P++EE +  +R RY  VI ALADKFPSENLL
Sbjct: 120 NWGFNVSELEAMLPAGTVDTTVERVYQELPQYEEGVPGSRIRYEKVIQALADKFPSENLL 179

Query: 131 LVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQISFNSDRA 3
           LVTHGEGVGV+ISAF KD  VYEV+YCA++H +R I F ++ +
Sbjct: 180 LVTHGEGVGVSISAFMKDATVYEVDYCAFSHSRRPIFFGNNES 222


>ref|XP_002302509.1| predicted protein [Populus trichocarpa] gi|222844235|gb|EEE81782.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  307 bits (787), Expect = 1e-81
 Identities = 148/225 (65%), Positives = 182/225 (80%)
 Frame = -2

Query: 698 SSRVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINR 519
           S  +QNV+VMRHGDRID+ EPLW TTA RPWDPPL+++G++RAF TGRKL+ +LGFPI+R
Sbjct: 14  SIHLQNVVVMRHGDRIDSLEPLWVTTATRPWDPPLVEAGRIRAFCTGRKLKTDLGFPIHR 73

Query: 518 VIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKVSVEFGLCEIISREAI 339
           V VSPF RCIQTASEVVSALCAV+D   V  S   ++ID SKLKVS+E+GLCE+++REAI
Sbjct: 74  VFVSPFLRCIQTASEVVSALCAVDDGPDV-VSSLGVTIDSSKLKVSIEYGLCEMLNREAI 132

Query: 338 RPDFAPKDGIWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEESLLDARARYACVIHALA 159
           R D APKDG +GF I ELEA  P GTVD     +Y E+P+WEE+++ AR RY  +I AL 
Sbjct: 133 RSDCAPKDGNFGFNISELEAMLPTGTVDHAVKPVYEELPQWEETVMGARTRYEQIIKALT 192

Query: 158 DKFPSENLLLVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQI 24
           DK+PSENLLLVTHGEGVGV++SAF KD  VYEV+YCAY+ L+R +
Sbjct: 193 DKYPSENLLLVTHGEGVGVSVSAFLKDISVYEVDYCAYSQLRRSV 237


>ref|XP_003626721.1| hypothetical protein MTR_8g006290 [Medicago truncatula]
           gi|355520743|gb|AET01197.1| hypothetical protein
           MTR_8g006290 [Medicago truncatula]
          Length = 272

 Score =  306 bits (784), Expect = 3e-81
 Identities = 152/248 (61%), Positives = 184/248 (74%)
 Frame = -2

Query: 746 STSSSSPIHIKMNPPTSSRVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAF 567
           S+SSSS     MNP   ++ QN+IVMRHGDRIDN +PLW +TA RPWDPPL++ G+VRAF
Sbjct: 6   SSSSSSSKSETMNPKKQTQYQNIIVMRHGDRIDNFDPLWISTAPRPWDPPLVEEGRVRAF 65

Query: 566 STGRKLRNNLGFPINRVIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLK 387
            T RK RN  G+P++RV VSPF RCIQTA E V AL A++D+    T GD++ IDPSK+K
Sbjct: 66  CTARKFRNLFGYPLHRVFVSPFIRCIQTAKEAVIALSAIHDNPEALT-GDSLPIDPSKIK 124

Query: 386 VSVEFGLCEIISREAIRPDFAPKDGIWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEES 207
           VSVE+GLCE++SR AIR + APKDG WGF I E EA  PAGTVD     +Y E+PKWEE 
Sbjct: 125 VSVEYGLCEMMSRRAIRLEVAPKDGNWGFDISEREAMLPAGTVDKNVARVYKELPKWEEP 184

Query: 206 LLDARARYACVIHALADKFPSENLLLVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQ 27
           L D RARY  ++  LADK P+ENLLLVTHGEGVGVA S+F K T VYEV+YC Y  L+R 
Sbjct: 185 LSDTRARYEKIVKDLADKHPTENLLLVTHGEGVGVAFSSFKKGTEVYEVDYCGYVELRRP 244

Query: 26  ISFNSDRA 3
           I F  D++
Sbjct: 245 I-FKKDQS 251


>ref|XP_002511618.1| conserved hypothetical protein [Ricinus communis]
           gi|223548798|gb|EEF50287.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  305 bits (780), Expect = 9e-81
 Identities = 144/221 (65%), Positives = 181/221 (81%)
 Frame = -2

Query: 686 QNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINRVIVS 507
           Q+V+V+RHGDRIDN +PLWT+TA RPWDPPL+DSG +RAFSTGR L++ L FPI+RV VS
Sbjct: 12  QHVVVIRHGDRIDNFDPLWTSTAPRPWDPPLVDSGLIRAFSTGRNLKSRLAFPIHRVFVS 71

Query: 506 PFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKVSVEFGLCEIISREAIRPDF 327
           PF RC+QTAS+ VSALCA+ D   V T+GD I+IDPSK+KVS+E+GLCE+++ +AIR D 
Sbjct: 72  PFFRCVQTASQAVSALCALEDGPDV-TAGDGIAIDPSKVKVSIEYGLCEMLNTQAIRHDV 130

Query: 326 APKDGIWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEESLLDARARYACVIHALADKFP 147
           APKDG + F I ELEA  P+GTVD T   +Y E+P+WEE++  +R RY  ++ ALADK+P
Sbjct: 131 APKDGKFSFNISELEALLPSGTVDHTVKPVYQELPRWEETVTSSRTRYEQIVKALADKYP 190

Query: 146 SENLLLVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQI 24
           SENLLLVTHGEGVGV++SAF KD  VYEVEYCAY+ L+R I
Sbjct: 191 SENLLLVTHGEGVGVSVSAFMKDVTVYEVEYCAYSELRRLI 231


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