BLASTX nr result

ID: Coptis23_contig00028354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028354
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. ly...    49   4e-09
ref|XP_002537148.1| Quinone oxidoreductase, putative [Ricinus co...    45   6e-09
ref|NP_193037.1| putative quinone-oxidoreductase-like protein [A...    48   7e-09
ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase h...    42   2e-08
dbj|BAJ34603.1| unnamed protein product [Thellungiella halophila]      46   3e-08

>ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297309115|gb|EFH39540.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 329

 Score = 48.9 bits (115), Expect(2) = 4e-09
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = -2

Query: 199 STFEPNLSEYGKVIDITPGPRALMTLLIEEINL 101
           STFEPNLSE GKVIDITPGP A+ T  ++++ +
Sbjct: 235 STFEPNLSENGKVIDITPGPSAMWTYAVKKVTM 267



 Score = 36.6 bits (83), Expect(2) = 4e-09
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -3

Query: 117 LKKLTFSKKQVVPVLLSAKAENLE 46
           +KK+T SKKQ+VP+LL  KAENLE
Sbjct: 262 VKKVTMSKKQLVPLLLIPKAENLE 285


>ref|XP_002537148.1| Quinone oxidoreductase, putative [Ricinus communis]
           gi|223517321|gb|EEF25235.1| Quinone oxidoreductase,
           putative [Ricinus communis]
          Length = 230

 Score = 44.7 bits (104), Expect(2) = 6e-09
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = -2

Query: 199 STFEPNLSEYGKVIDITPGPRALMTLLIEEI 107
           STFEPNLSE GKVIDITP   A+MT  ++++
Sbjct: 136 STFEPNLSENGKVIDITPNATAMMTFALKKL 166



 Score = 40.4 bits (93), Expect(2) = 6e-09
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = -3

Query: 123 F*LKKLTFSKKQVVPVLLSAKAENLE 46
           F LKKLTFSKKQ+VP++++ KAENL+
Sbjct: 161 FALKKLTFSKKQLVPLIVTVKAENLD 186


>ref|NP_193037.1| putative quinone-oxidoreductase-like protein [Arabidopsis thaliana]
           gi|67460977|sp|Q9SV68.1|QORH_ARATH RecName:
           Full=Putative quinone-oxidoreductase homolog,
           chloroplastic gi|15724256|gb|AAL06521.1|AF412068_1
           AT4g13010/F25G13_100 [Arabidopsis thaliana]
           gi|5123942|emb|CAB45500.1| putative protein [Arabidopsis
           thaliana] gi|7268003|emb|CAB78343.1| putative protein
           [Arabidopsis thaliana] gi|15028001|gb|AAK76531.1|
           unknown protein [Arabidopsis thaliana]
           gi|15912237|gb|AAL08252.1| AT4g13010/F25G13_100
           [Arabidopsis thaliana] gi|21436057|gb|AAM51229.1|
           unknown protein [Arabidopsis thaliana]
           gi|332657813|gb|AEE83213.1| putative
           quinone-oxidoreductase-like protein [Arabidopsis
           thaliana]
          Length = 329

 Score = 47.8 bits (112), Expect(2) = 7e-09
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = -2

Query: 199 STFEPNLSEYGKVIDITPGPRALMTLLIEEINL 101
           S FEPNLSE GKVIDITPGP A+ T  +++I +
Sbjct: 235 SVFEPNLSENGKVIDITPGPNAMWTYAVKKITM 267



 Score = 37.0 bits (84), Expect(2) = 7e-09
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -3

Query: 117 LKKLTFSKKQVVPVLLSAKAENLE 46
           +KK+T SKKQ+VP+LL  KAENLE
Sbjct: 262 VKKITMSKKQLVPLLLIPKAENLE 285


>ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic
           [Vitis vinifera]
          Length = 329

 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = -3

Query: 123 F*LKKLTFSKKQVVPVLLSAKAENLE 46
           F LKKLTFSKKQ+VP+LLS K ENLE
Sbjct: 260 FALKKLTFSKKQLVPLLLSPKKENLE 285



 Score = 40.8 bits (94), Expect(2) = 2e-08
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -2

Query: 199 STFEPNLSEYGKVIDITPGPRALMTLLIEEI 107
           STFEPNLS  GKVIDITP   A++T  ++++
Sbjct: 235 STFEPNLSTNGKVIDITPNASAMVTFALKKL 265


>dbj|BAJ34603.1| unnamed protein product [Thellungiella halophila]
          Length = 329

 Score = 45.8 bits (107), Expect(2) = 3e-08
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = -2

Query: 199 STFEPNLSEYGKVIDITPGPRALMTLLIEEINL 101
           STFEPNL+  GKVIDITPGP A+ T  +++I +
Sbjct: 235 STFEPNLAANGKVIDITPGPSAMWTYAVKKITM 267



 Score = 37.0 bits (84), Expect(2) = 3e-08
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -3

Query: 117 LKKLTFSKKQVVPVLLSAKAENLE 46
           +KK+T SKKQ+VP+LL  KAENLE
Sbjct: 262 VKKITMSKKQLVPLLLIPKAENLE 285


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