BLASTX nr result
ID: Coptis23_contig00028339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00028339
(835 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283440.1| PREDICTED: aspartyl-tRNA synthetase, cytopla... 113 1e-65
ref|XP_002523450.1| aspartyl-tRNA synthetase, putative [Ricinus ... 107 3e-63
ref|XP_004162485.1| PREDICTED: aspartate--tRNA ligase, cytoplasm... 107 3e-63
ref|XP_004136326.1| PREDICTED: aspartate--tRNA ligase, cytoplasm... 107 3e-63
ref|XP_003550250.1| PREDICTED: aspartyl-tRNA synthetase, cytopla... 114 2e-61
>ref|XP_002283440.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Vitis vinifera]
Length = 544
Score = 113 bits (282), Expect(3) = 1e-65
Identities = 55/70 (78%), Positives = 60/70 (85%)
Frame = -1
Query: 211 LRTPANQGIFRVQYTVIKIFQDYLESQGFCGVITPKLLAGSSEGGSAVFRLDYKGQPACL 32
LRTPANQ IFRVQ V IF+ +L S+GF G+ TPKL+ GSSEGGSAVFRLDYKGQPACL
Sbjct: 230 LRTPANQAIFRVQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGGSAVFRLDYKGQPACL 289
Query: 31 AQSPQLHKQM 2
AQSPQLHKQM
Sbjct: 290 AQSPQLHKQM 299
Score = 98.2 bits (243), Expect(3) = 1e-65
Identities = 51/105 (48%), Positives = 69/105 (65%)
Frame = -2
Query: 732 DPLSSNYGDIISP*LTCNPSLKVAANGVGSLNEGLEDKLVLIRGRVNTTRKLGNKIAFLE 553
DPL+SNYGD+ L + +G+L E L+D+ VLIRGR T R +G IAFL
Sbjct: 59 DPLASNYGDVPLLDLQSKEVTGLKWTDIGALTEDLKDQKVLIRGRAQTIRAVGKNIAFLV 118
Query: 552 LKREGFTVQCAVAESPGFVSRKMVKHVSDLSKESIVDVYGIVSVP 418
+++ GFTVQC + +P VSR MVK+ + LS+ES VD+ GI+SVP
Sbjct: 119 VRQMGFTVQCVLTVAPDLVSRHMVKYATGLSRESHVDIEGIISVP 163
Score = 86.7 bits (213), Expect(3) = 1e-65
Identities = 41/67 (61%), Positives = 53/67 (79%)
Frame = -3
Query: 407 PIRRTTQQVEAQVRTIYCVNRAQKLPVNIDDGARSEDDIENALRAGVQLARVNLDTRLNY 228
PI+ TQQVE QVR +Y +++A+ LP+NI+D ARSE +IE AL+AG QL RVN DTRLNY
Sbjct: 166 PIKGATQQVEVQVRKLYGISKAENLPINIEDAARSESEIEKALQAGEQLVRVNQDTRLNY 225
Query: 227 RFINLLT 207
R ++L T
Sbjct: 226 RVLDLRT 232
>ref|XP_002523450.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
gi|223537278|gb|EEF38909.1| aspartyl-tRNA synthetase,
putative [Ricinus communis]
Length = 540
Score = 107 bits (268), Expect(3) = 3e-63
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = -1
Query: 211 LRTPANQGIFRVQYTVIKIFQDYLESQGFCGVITPKLLAGSSEGGSAVFRLDYKGQPACL 32
+RTPANQGIFR+Q V IF+ +L S+ F + TPKL+AGSSEGGSAVF+LDYKGQPACL
Sbjct: 226 MRTPANQGIFRIQSEVGNIFRQFLLSEDFDEIHTPKLIAGSSEGGSAVFKLDYKGQPACL 285
Query: 31 AQSPQLHKQM 2
AQSPQLHKQM
Sbjct: 286 AQSPQLHKQM 295
Score = 100 bits (248), Expect(3) = 3e-63
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = -2
Query: 744 E*KADPLSSNYGDIISP*LTCNPSLKVAA-NGVGSLNEGLEDKLVLIRGRVNTTRKLGNK 568
E + DPLS NYG+ L ++ VG LNE L+DK +LIRGR TTR +G
Sbjct: 49 EDQEDPLSGNYGNTPLSDLQSKEESDLSEWTRVGQLNEELKDKELLIRGRAQTTRAVGKN 108
Query: 567 IAFLELKREGFTVQCAVAESPGFVSRKMVKHVSDLSKESIVDVYGIVSVPN 415
+AF+ ++++GFTVQC V VSR+MVK V+ LS+ESIVDV G+VSVPN
Sbjct: 109 MAFVVVRQKGFTVQCVVTVQADLVSRQMVKFVAGLSRESIVDVRGVVSVPN 159
Score = 82.4 bits (202), Expect(3) = 3e-63
Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = -3
Query: 407 PIRRTTQQVEAQVRTIYCVNRA-QKLPVNIDDGARSEDDIENALRAGVQLARVNLDTRLN 231
PI+ TTQQVE QVR +YC+++A LP+NI+D ARSE +IE AL+ G Q RVN DTRLN
Sbjct: 161 PIKGTTQQVEVQVRKLYCISKAIPTLPINIEDAARSEKEIEEALQRGEQFVRVNQDTRLN 220
Query: 230 YRFINLLT 207
YR +++ T
Sbjct: 221 YRVLDMRT 228
>ref|XP_004162485.1| PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cucumis
sativus]
Length = 545
Score = 107 bits (268), Expect(3) = 3e-63
Identities = 59/108 (54%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Frame = -2
Query: 732 DPLSSNYGDIISP*LTCNPSLKVAANG--VGSLNEGLEDKLVLIRGRVNTTRKLGNKIAF 559
DPLS+NYGD+ L + +K N VGSL L+DK V++RGRV T R +G K+AF
Sbjct: 58 DPLSANYGDVPLSDLQ-SKEVKSIENWTQVGSLTPELKDKYVILRGRVQTIRAVGKKMAF 116
Query: 558 LELKREGFTVQCAVAESPGFVSRKMVKHVSDLSKESIVDVYGIVSVPN 415
L ++ +GFTVQC ++E P VSR+MVK+V LS+ESIVDV G+VSVPN
Sbjct: 117 LVVREKGFTVQCVLSEQPELVSRQMVKYVDGLSRESIVDVEGVVSVPN 164
Score = 103 bits (258), Expect(3) = 3e-63
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = -1
Query: 211 LRTPANQGIFRVQYTVIKIFQDYLESQGFCGVITPKLLAGSSEGGSAVFRLDYKGQPACL 32
+RTPANQGIFR+Q V +F+ +L + F + TPKL+ GSSEGG++VFRLDYKGQPACL
Sbjct: 231 MRTPANQGIFRIQCQVSTMFRQFLLDENFVEIHTPKLIGGSSEGGASVFRLDYKGQPACL 290
Query: 31 AQSPQLHKQM 2
AQSPQLHKQM
Sbjct: 291 AQSPQLHKQM 300
Score = 78.6 bits (192), Expect(3) = 3e-63
Identities = 38/67 (56%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 404 IRRTTQQVEAQVRTIYCVNRAQK-LPVNIDDGARSEDDIENALRAGVQLARVNLDTRLNY 228
I+ +QQVE QVR +YC+++A LP+NI+D ARSE +I+ AL+AG QL RVN DTRLNY
Sbjct: 167 IKGASQQVEIQVRKVYCISKAMPTLPINIEDAARSEAEIDKALQAGEQLVRVNQDTRLNY 226
Query: 227 RFINLLT 207
R +++ T
Sbjct: 227 RVLDMRT 233
>ref|XP_004136326.1| PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cucumis
sativus]
Length = 545
Score = 107 bits (268), Expect(3) = 3e-63
Identities = 59/108 (54%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Frame = -2
Query: 732 DPLSSNYGDIISP*LTCNPSLKVAANG--VGSLNEGLEDKLVLIRGRVNTTRKLGNKIAF 559
DPLS+NYGD+ L + +K N VGSL L+DK V++RGRV T R +G K+AF
Sbjct: 58 DPLSANYGDVPLSDLQ-SKEVKSIENWTQVGSLTPELKDKYVILRGRVQTIRAVGKKMAF 116
Query: 558 LELKREGFTVQCAVAESPGFVSRKMVKHVSDLSKESIVDVYGIVSVPN 415
L ++ +GFTVQC ++E P VSR+MVK+V LS+ESIVDV G+VSVPN
Sbjct: 117 LVVREKGFTVQCVLSEQPELVSRQMVKYVDGLSRESIVDVEGVVSVPN 164
Score = 103 bits (258), Expect(3) = 3e-63
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = -1
Query: 211 LRTPANQGIFRVQYTVIKIFQDYLESQGFCGVITPKLLAGSSEGGSAVFRLDYKGQPACL 32
+RTPANQGIFR+Q V +F+ +L + F + TPKL+ GSSEGG++VFRLDYKGQPACL
Sbjct: 231 MRTPANQGIFRIQCQVSTMFRQFLLDENFVEIHTPKLIGGSSEGGASVFRLDYKGQPACL 290
Query: 31 AQSPQLHKQM 2
AQSPQLHKQM
Sbjct: 291 AQSPQLHKQM 300
Score = 78.6 bits (192), Expect(3) = 3e-63
Identities = 38/67 (56%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 404 IRRTTQQVEAQVRTIYCVNRAQK-LPVNIDDGARSEDDIENALRAGVQLARVNLDTRLNY 228
I+ +QQVE QVR +YC+++A LP+NI+D ARSE +I+ AL+AG QL RVN DTRLNY
Sbjct: 167 IKGASQQVEIQVRKVYCISKAMPTLPINIEDAARSEAEIDKALQAGEQLVRVNQDTRLNY 226
Query: 227 RFINLLT 207
R +++ T
Sbjct: 227 RVLDMRT 233
>ref|XP_003550250.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Glycine max]
Length = 544
Score = 114 bits (285), Expect(3) = 2e-61
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = -1
Query: 211 LRTPANQGIFRVQYTVIKIFQDYLESQGFCGVITPKLLAGSSEGGSAVFRLDYKGQPACL 32
+RTPANQGIFR+Q V F+ +L SQGFC + TPKL+AGSSEGG+AVFRLDYKGQPACL
Sbjct: 230 VRTPANQGIFRIQSQVGNAFRQFLVSQGFCEIHTPKLIAGSSEGGAAVFRLDYKGQPACL 289
Query: 31 AQSPQLHKQM 2
AQSPQLHKQM
Sbjct: 290 AQSPQLHKQM 299
Score = 87.8 bits (216), Expect(3) = 2e-61
Identities = 51/106 (48%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = -2
Query: 732 DPLSSNYGDIISP*LTCNPSLKVAA-NGVGSLNEGLEDKLVLIRGRVNTTRKLGNKIAFL 556
DPL NYGD+ L V V +L LE+ VLIRGR R +G K+AFL
Sbjct: 57 DPLGGNYGDVPLVELQSKTPSDVGEWTRVEALGGALENNSVLIRGRAQAIRPVGKKMAFL 116
Query: 555 ELKREGFTVQCAVAESPGFVSRKMVKHVSDLSKESIVDVYGIVSVP 418
++ GFTVQC V P VS +MVK + LS+ESIVDV G+VSVP
Sbjct: 117 VIRENGFTVQCLVQAQPDTVSAQMVKFAAALSRESIVDVEGVVSVP 162
Score = 81.6 bits (200), Expect(3) = 2e-61
Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = -3
Query: 407 PIRRTTQQVEAQVRTIYCVNRA-QKLPVNIDDGARSEDDIENALRAGVQLARVNLDTRLN 231
PI+ TQQVE QVR +YCV+RA LP+N++D ARSE +IE AL+AG QL RVN DTRLN
Sbjct: 165 PIKGATQQVEIQVRKLYCVSRAVPTLPINLEDAARSEVEIEKALQAGEQLVRVNQDTRLN 224
Query: 230 YRFINLLT 207
+R +++ T
Sbjct: 225 FRVLDVRT 232