BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028327
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus com...    94   1e-17
ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 prote...    89   5e-16
emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]    87   2e-15
ref|XP_003616514.1| Sister chromatid cohesion 1 protein [Medicag...    86   3e-15
ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14

>ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223539902|gb|EEF41480.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 613

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 57/131 (43%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
 Frame = +3

Query: 6   PQLDYEQTIIPGPLYQSWLQKTADIVTNRGGTKK-RIIPISTMKTAHLMELPPGAXXXXX 182
           P +DYEQTIIPGP YQSWLQ  +DIV+ RG  +K R   +S MKTA+LMELPP       
Sbjct: 270 PAMDYEQTIIPGPTYQSWLQNASDIVSRRGRKRKARRDIMSKMKTANLMELPPLVLIDDL 329

Query: 183 XXXXXTEIHYPRPLLDLHLRSAQHRTPHDXXXXXXXXXXXXXXXXXXXXXFN--QNPVKF 356
                 EI+YP PLL+L ++S Q   PHD                         Q+P  +
Sbjct: 330 SANANGEIYYPAPLLELWMKSTQ--PPHDSPSARTSAPLPPEPSSSSPLERGDYQDPTGY 387

Query: 357 SVEDFHSGVGS 389
             EDF SG+GS
Sbjct: 388 PFEDFQSGIGS 398


>ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 protein 1-like [Vitis
           vinifera]
          Length = 608

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 58/138 (42%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
 Frame = +3

Query: 12  LDYEQTIIPGPLYQSWLQKTADIVTNRGGTKKRIIPISTMKTAHLMELPPGAXXXXXXXX 191
           +D EQ IIPG LYQSWLQ  ++IV  RG  +K ++PI  +K A+LMELPP          
Sbjct: 270 MDDEQIIIPGNLYQSWLQDPSNIVARRGKRRKNLMPI--VKIANLMELPPSTLIDGILTS 327

Query: 192 XXTEIHYPRPLLDLHLRSAQHRTPHD--XXXXXXXXXXXXXXXXXXXXXFNQNPVKFSVE 365
              EI YP PLL+L +RS Q   PHD                        +Q P  F  E
Sbjct: 328 GTGEIQYPAPLLELWMRSIQ--LPHDSPSGRNTPPQPPEPSSSSPSHRVHHQGPAGFPFE 385

Query: 366 DFHSGVGSHPEHPSIERQ 419
           DF SGVGS     SIE+Q
Sbjct: 386 DFLSGVGSPSLGVSIEKQ 403


>emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]
          Length = 597

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 57/138 (41%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
 Frame = +3

Query: 12  LDYEQTIIPGPLYQSWLQKTADIVTNRGGTKKRIIPISTMKTAHLMELPPGAXXXXXXXX 191
           +D EQ IIPG LYQSWLQ  ++IV  RG  +K ++P   +K A+LMELPP          
Sbjct: 264 MDDEQIIIPGNLYQSWLQDPSNIVARRGKRRKNLMP--XVKIANLMELPPSTLIDGILTS 321

Query: 192 XXTEIHYPRPLLDLHLRSAQHRTPHD--XXXXXXXXXXXXXXXXXXXXXFNQNPVKFSVE 365
              EI YP PLL+L +RS Q   PHD                        +Q P  F  E
Sbjct: 322 GTGEIQYPAPLLELWMRSIQ--LPHDSPSGRNTPPQPPEPSSSSPSHRVHHQGPAGFPFE 379

Query: 366 DFHSGVGSHPEHPSIERQ 419
           DF SGVGS     SIE+Q
Sbjct: 380 DFLSGVGSPSLGVSIEKQ 397


>ref|XP_003616514.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
           gi|355517849|gb|AES99472.1| Sister chromatid cohesion 1
           protein [Medicago truncatula]
          Length = 333

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
 Frame = +3

Query: 9   QLDYEQTIIPGPLYQSWLQKTADIVTNRGGTKKRIIPISTMKTAHLMELPPGAXXXXXXX 188
           Q+DYEQT+IP P YQ+WLQ  AD+V+ RGG +KR   +S+ K A+LME+PP A       
Sbjct: 27  QMDYEQTMIPAPNYQNWLQNPADLVSRRGGMEKRHDIMSSTKIANLMEVPPVALNGGLLS 86

Query: 189 XXXTEIHYPRPLLDLHLRSAQ--HRTP 263
               +I+YP PLLDL ++S Q  H +P
Sbjct: 87  RVNKDIYYPAPLLDLWIKSTQPPHNSP 113


>ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|222851997|gb|EEE89544.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 55/138 (39%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
 Frame = +3

Query: 12  LDYEQTIIPGPLYQSWLQKTADIVTNRGGTKK-RIIPISTMKTAHLMELPPGAXXXXXXX 188
           +DYEQTIIPG +YQSWLQ  +DIV+ RG  +K R+  +ST K ++LMELPP         
Sbjct: 265 VDYEQTIIPGHVYQSWLQNASDIVSRRGRKRKARMGIMSTTKISNLMELPPTVLIDDNGN 324

Query: 189 XXXTEIHYPRPLLDLHLRSAQHRTPHDXXXXXXXXXXXXXXXXXXXXXF--NQNPVKFSV 362
               EI+YP PLL+L  +S Q   PHD                         + P  ++ 
Sbjct: 325 R---EIYYPAPLLELWTKSTQ--PPHDSPSERTSAPLPPEPSKSSPPDRVNYEEPAGYTF 379

Query: 363 EDFHSGVGSHPEHPSIER 416
           +D HSGVGS     SIE+
Sbjct: 380 DDVHSGVGSQSLGTSIEK 397