BLASTX nr result

ID: Coptis23_contig00028326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028326
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545179.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...    68   9e-10
ref|XP_003518461.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...    67   2e-09
ref|XP_003556823.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...    66   3e-09
ref|XP_002279046.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    64   1e-08
emb|CBI22289.3| unnamed protein product [Vitis vinifera]               64   1e-08

>ref|XP_003545179.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 849

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = -3

Query: 354 AAKVYTINPFNKFKEQLEKAKTEYKFDGDEIVNNGTGSY--MVKFRDPQKKSVWKVSFNR 181
           AA +YT   F+KF+E+L +    + +  + I  +G  S   + KF D QK  V+ V+ N 
Sbjct: 474 AANLYTRKIFSKFQEELVET---FAYTANRIEEDGENSIFRVAKFEDDQK--VYIVTLNL 528

Query: 180 GTLEGDCECKYFQFMGLLCGHMLKLFLCYDIEEISKHFLLKRW 52
             L  +C C+ F++ G+LC H+L +F   ++  +  H++LKRW
Sbjct: 529 SELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRW 571


>ref|XP_003518461.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 879

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
 Frame = -3

Query: 354 AAKVYTINPFNKFKEQLEKAKTEYKFDGDEIVNNGTGSY--MVKFRDPQKKSVWKVSFNR 181
           AA +YT   F+KF+E+L +    + +  + I  +G  S   + KF D QK  V  V+ N 
Sbjct: 503 AANLYTRKIFSKFQEELVET---FAYTANRIEEDGENSIFRVAKFEDDQKAYV--VTLNL 557

Query: 180 GTLEGDCECKYFQFMGLLCGHMLKLFLCYDIEEISKHFLLKRW 52
             L  +C C+ F++ G+LC H+L +F   ++  +  H++LKRW
Sbjct: 558 SELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRW 600


>ref|XP_003556823.1| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Glycine max]
          Length = 854

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = -3

Query: 354 AAKVYTINPFNKFKEQLEKAKTEYKFDGDEIVNNGTGSY--MVKFRDPQKKSVWKVSFNR 181
           AA +YT   F+KF+++L +    + +  + I  +G  S   + KF D QK   + V+ N 
Sbjct: 479 AANLYTRKIFSKFQDELVET---FVYTANRIEGDGPNSTFRVAKFEDDQK--AYMVTLNH 533

Query: 180 GTLEGDCECKYFQFMGLLCGHMLKLFLCYDIEEISKHFLLKRW 52
             L+ +C C+ F++ G+LC H+L +F   ++  +  H++LKRW
Sbjct: 534 SELKANCSCQMFEYAGILCKHILTVFTVTNVLTLPPHYILKRW 576


>ref|XP_002279046.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 827

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = -3

Query: 354 AAKVYTINPFNKFKEQL-EKAKTEYKFDGDEIVNNGTGSYMVKFRDPQKKSVWKVSFNRG 178
           AA+VYT   F  F+++L E      K  G    + G+ +Y V   D + K V+ V+ N  
Sbjct: 544 AAEVYTRKMFTIFQDELFESLVLAVKLTG---ADEGSHTYEVARFDEEHK-VYFVALNVS 599

Query: 177 TLEGDCECKYFQFMGLLCGHMLKLFLCYDIEEISKHFLLKRW 52
              G C CK F+F G+LC HML +F   +I  +  HF+LKRW
Sbjct: 600 KQIGSCSCKMFEFEGILCRHMLAVFKATNIFTLPPHFILKRW 641


>emb|CBI22289.3| unnamed protein product [Vitis vinifera]
          Length = 855

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
 Frame = -3

Query: 354 AAKVYTINPFNKFKEQL-EKAKTEYKFDGDEIVNNGTGSYMVKFRDPQKKSVWKVSFNRG 178
           AA+VYT   F  F+++L E      K  G    + G+ +Y V   D + K V+ V+ N  
Sbjct: 572 AAEVYTRKMFTIFQDELFESLVLAVKLTG---ADEGSHTYEVARFDEEHK-VYFVALNVS 627

Query: 177 TLEGDCECKYFQFMGLLCGHMLKLFLCYDIEEISKHFLLKRW 52
              G C CK F+F G+LC HML +F   +I  +  HF+LKRW
Sbjct: 628 KQIGSCSCKMFEFEGILCRHMLAVFKATNIFTLPPHFILKRW 669


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