BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028324
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    76   2e-12
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    75   7e-12
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   75   7e-12
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    75   7e-12
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    73   2e-11

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 32/84 (38%), Positives = 55/84 (65%)
 Frame = +3

Query: 9    FVLVMEILNGLLEQSVLEGDFKYHSKCKELVITHICFADDILLFSKGDMRSLEAIKWVIM 188
            FV+ M +L+ +L++  +E  F YH +C+ + +TH+CFADDI++FS G   SLE +  +  
Sbjct: 922  FVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFK 981

Query: 189  KFTECTGLHINYSKTSILTGSMSS 260
             F   +GL+I+  K+++   S+SS
Sbjct: 982  DFAAFSGLNISLEKSTLFMASISS 1005


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/83 (40%), Positives = 56/83 (67%)
 Frame = +3

Query: 9   FVLVMEILNGLLEQSVLEGDFKYHSKCKELVITHICFADDILLFSKGDMRSLEAIKWVIM 188
           FV+ ME+L+ +L+Q+     F +H KCK L +TH+CFADD+++ + G +RS++ I  V+ 
Sbjct: 584 FVISMEVLSKMLDQAAGAKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMN 643

Query: 189 KFTECTGLHINYSKTSILTGSMS 257
            F + +GL IN  KT++ T  +S
Sbjct: 644 LFAKRSGLKINMEKTTLYTAGVS 666


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/88 (37%), Positives = 55/88 (62%)
 Frame = +3

Query: 9   FVLVMEILNGLLEQSVLEGDFKYHSKCKELVITHICFADDILLFSKGDMRSLEAIKWVIM 188
           F++ ME+L+ +L++   E     H KC   VITH+ FADDI++F+ G+ RSL  +K  + 
Sbjct: 114 FIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLD 173

Query: 189 KFTECTGLHINYSKTSILTGSMSSTESN 272
            F+  +GL++N  KT I    ++ TE++
Sbjct: 174 SFSRASGLYLNTEKTEIFLRGLNGTEAS 201


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/83 (40%), Positives = 56/83 (67%)
 Frame = +3

Query: 9   FVLVMEILNGLLEQSVLEGDFKYHSKCKELVITHICFADDILLFSKGDMRSLEAIKWVIM 188
           FV+ ME+L+ +L+Q+     F +H KCK L +TH+CFADD+++ + G +RS++ I  V+ 
Sbjct: 72  FVISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMN 131

Query: 189 KFTECTGLHINYSKTSILTGSMS 257
            F + +GL IN  KT++ T  +S
Sbjct: 132 LFAKRSGLQINMEKTTLYTAGVS 154


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/89 (35%), Positives = 57/89 (64%)
 Frame = +3

Query: 9   FVLVMEILNGLLEQSVLEGDFKYHSKCKELVITHICFADDILLFSKGDMRSLEAIKWVIM 188
           FV+ M +L+ LL+++  +  F YH +CK++ +TH+ FADD+++ S G +RS+E I  V  
Sbjct: 49  FVVSMNVLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFE 108

Query: 189 KFTECTGLHINYSKTSILTGSMSSTESNQ 275
            F +C+GL I+  K+++    +S T   +
Sbjct: 109 TFAKCSGLRISMEKSTVYFAGLSHTSPQE 137