BLASTX nr result

ID: Coptis23_contig00028305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028305
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...   111   7e-23
emb|CBI27491.3| unnamed protein product [Vitis vinifera]              111   7e-23
emb|CBI27489.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...   108   6e-22
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   105   5e-21

>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/133 (40%), Positives = 83/133 (62%)
 Frame = -2

Query: 401  LRQIFITVSVNLCSVVKDYINRLKRCIFGIEIQAGSSDGEMWELGDSLSMFSDIPDSFTN 222
            LRQ+F+TVS  LC  VK +++ LK    G +  A S+   + +  D   +F+DI DS  +
Sbjct: 1170 LRQLFVTVSPKLCHAVKQHVSHLKSFAHGKKFSAESNSNNI-DYVDDAELFNDIQDSLVD 1228

Query: 221  MPQRHFPIVVSLHKFLLMLDGSLSRSFFNRFKDLKVISDGQRSTMTHAQQQIILGKEVRF 42
            +P + +P+VV+ HKFL+MLDG+L  S+F RF+D+     G+RS  +   Q  I  KEV +
Sbjct: 1229 IPPKSYPLVVTFHKFLMMLDGTLGNSYFERFRDVWEFYRGKRSLSSIGMQTFIRTKEVTY 1288

Query: 41   ERFLTLYWPSFDA 3
            +RF + YWP F++
Sbjct: 1289 DRFSSSYWPHFNS 1301


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/133 (40%), Positives = 83/133 (62%)
 Frame = -2

Query: 401  LRQIFITVSVNLCSVVKDYINRLKRCIFGIEIQAGSSDGEMWELGDSLSMFSDIPDSFTN 222
            LRQ+F+TVS  LC  VK +++ LK    G +  A S+   + +  D   +F+DI DS  +
Sbjct: 4553 LRQLFVTVSPKLCHAVKQHVSHLKSFAHGKKFSAESNSNNI-DYVDDAELFNDIQDSLVD 4611

Query: 221  MPQRHFPIVVSLHKFLLMLDGSLSRSFFNRFKDLKVISDGQRSTMTHAQQQIILGKEVRF 42
            +P + +P+VV+ HKFL+MLDG+L  S+F RF+D+     G+RS  +   Q  I  KEV +
Sbjct: 4612 IPPKSYPLVVTFHKFLMMLDGTLGNSYFERFRDVWEFYRGKRSLSSIGMQTFIRTKEVTY 4671

Query: 41   ERFLTLYWPSFDA 3
            +RF + YWP F++
Sbjct: 4672 DRFSSSYWPHFNS 4684



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/134 (34%), Positives = 74/134 (55%)
 Frame = -2

Query: 410 GYGLRQIFITVSVNLCSVVKDYINRLKRCIFGIEIQAGSSDGEMWELGDSLSMFSDIPDS 231
           G  L Q+F+TVS  L +   +++           +++ S D    +  D    F DIPDS
Sbjct: 392 GACLHQLFVTVSPRLFASGGEFL-----------VESSSLD---LDYIDDTVQFKDIPDS 437

Query: 230 FTNMPQRHFPIVVSLHKFLLMLDGSLSRSFFNRFKDLKVISDGQRSTMTHAQQQIILGKE 51
           F N+P + +P+V++ HKFL+MLDG++  S+F+RF       D  + + T   +  I  +E
Sbjct: 438 FVNIPSKSYPLVITFHKFLMMLDGTVGNSYFSRF------PDAHKPSRTVTLKTFIRSRE 491

Query: 50  VRFERFLTLYWPSF 9
           V +ERF++ YWP F
Sbjct: 492 VNYERFISSYWPYF 505


>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score =  108 bits (270), Expect = 5e-22
 Identities = 59/148 (39%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443  HNKRCENNAVAGYGLRQIFITVSVNLCSVVKDYINRLKRCIFGIEIQAGSSDGEMWELGD 264
            H    E   VA   LRQ+F+TVS  LC  VK +++ LK    G    A  S     +  D
Sbjct: 1074 HRMAMEETQVAV--LRQLFVTVSPKLCYAVKQHVSHLKSFAHGKNFSAEESSNNK-DYVD 1130

Query: 263  SLSMFSDIPDSFTNMPQRHFPIVVSLHKFLLMLDGSLSRSFFNRFKDLKVISDGQ-RSTM 87
               +F DI DS  ++P + +P+VV+ HKFL+MLD +LS S+F+RF D++ +S G+ RS  
Sbjct: 1131 DAELFDDIQDSLVDIPPKSYPLVVTFHKFLMMLDETLSNSYFDRFHDVRELSHGKSRSLS 1190

Query: 86   THAQQQIILGKEVRFERFLTLYWPSFDA 3
            +   Q +I  KEV ++RF + YWP F++
Sbjct: 1191 SIGMQTLIRTKEVTYDRFSSSYWPHFNS 1218


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/134 (41%), Positives = 83/134 (61%), Gaps = 1/134 (0%)
 Frame = -2

Query: 401  LRQIFITVSVNLCSVVKDYINRLKRCIFGIEIQAGSSDGEMWELGDSLSMFSDIPDSFTN 222
            LRQ+F+TVS  LC  VK +++ LK    G    A  S     +  D   +F DI DS  +
Sbjct: 1148 LRQLFVTVSPKLCYAVKQHVSHLKSFAHGKNFSAEESSNNK-DYVDDAELFDDIQDSLVD 1206

Query: 221  MPQRHFPIVVSLHKFLLMLDGSLSRSFFNRFKDLKVISDGQ-RSTMTHAQQQIILGKEVR 45
            +P + +P+VV+ HKFL+MLD +LS S+F+RF D++ +S G+ RS  +   Q +I  KEV 
Sbjct: 1207 IPPKSYPLVVTFHKFLMMLDETLSNSYFDRFHDVRELSHGKSRSLSSIGMQTLIRTKEVT 1266

Query: 44   FERFLTLYWPSFDA 3
            ++RF + YWP F++
Sbjct: 1267 YDRFSSSYWPHFNS 1280


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/133 (39%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = -2

Query: 401  LRQIFITVSVNLCSVVKDYINRLKRCIFGIEIQAGSSDGEMWELGDSLSMFSDIPDSFTN 222
            L Q+F+TVS  LC  VK  +++LKR   G +   GSS  +M ++ D+ + F DIPDS  +
Sbjct: 1177 LHQLFVTVSPKLCYAVKHQVSQLKRFASGGKCFVGSSSIDMEDIDDT-AQFKDIPDSLID 1235

Query: 221  MPQRHFPIVVSLHKFLLMLDGSLSRSFFNRFKDLKVISDGQ-RSTMTHAQQQIILGKEVR 45
            +P   FP+V++  KFL+MLDG++  S+F RF D + +  G+  ++ + A Q  I  +EV 
Sbjct: 1236 IPPESFPLVITFFKFLMMLDGTIGNSYFERFPDARQLLHGKIGNSGSLALQTFIRTREVN 1295

Query: 44   FERFLTLYWPSFD 6
            +++F ++YWP FD
Sbjct: 1296 YDKFCSVYWPHFD 1308


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