BLASTX nr result

ID: Coptis23_contig00028303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028303
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303727.1| predicted protein [Populus trichocarpa] gi|2...    44   8e-08
ref|XP_004145951.1| PREDICTED: membrane-bound transcription fact...    40   3e-07
ref|XP_004160399.1| PREDICTED: LOW QUALITY PROTEIN: membrane-bou...    40   3e-07

>ref|XP_002303727.1| predicted protein [Populus trichocarpa] gi|222841159|gb|EEE78706.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score = 43.5 bits (101), Expect(2) = 8e-08
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +2

Query: 2   GYLLFSTLISVAVHEFGHAIAAA 70
           GYLL STLISV+VHEFGH+IAAA
Sbjct: 125 GYLLLSTLISVSVHEFGHSIAAA 147



 Score = 37.7 bits (86), Expect(2) = 8e-08
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = +3

Query: 150 STHNSDGIHIEYFAIYIALLFPGALVA 230
           S+ +S+GI  EY AI++A+LFPGALVA
Sbjct: 171 SSGSSEGIPTEYIAIFLAVLFPGALVA 197


>ref|XP_004145951.1| PREDICTED: membrane-bound transcription factor site-2 protease-like
           [Cucumis sativus]
          Length = 541

 Score = 40.4 bits (93), Expect(2) = 3e-07
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +2

Query: 2   GYLLFSTLISVAVHEFGHAIAAA 70
           GY++ STLISVA HEFGHA AAA
Sbjct: 132 GYIIISTLISVAFHEFGHAAAAA 154



 Score = 38.9 bits (89), Expect(2) = 3e-07
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +3

Query: 162 SDGIHIEYFAIYIALLFPGALVA 230
           S+G+ +EY A++IALLFPGALVA
Sbjct: 155 SEGVKLEYIAVFIALLFPGALVA 177


>ref|XP_004160399.1| PREDICTED: LOW QUALITY PROTEIN: membrane-bound transcription factor
           site-2 protease-like [Cucumis sativus]
          Length = 447

 Score = 40.4 bits (93), Expect(2) = 3e-07
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +2

Query: 2   GYLLFSTLISVAVHEFGHAIAAA 70
           GY++ STLISVA HEFGHA AAA
Sbjct: 38  GYIIISTLISVAFHEFGHAAAAA 60



 Score = 38.9 bits (89), Expect(2) = 3e-07
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +3

Query: 162 SDGIHIEYFAIYIALLFPGALVA 230
           S+G+ +EY A++IALLFPGALVA
Sbjct: 61  SEGVKLEYIAVFIALLFPGALVA 83


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