BLASTX nr result
ID: Coptis23_contig00028303
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00028303 (231 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303727.1| predicted protein [Populus trichocarpa] gi|2... 44 8e-08 ref|XP_004145951.1| PREDICTED: membrane-bound transcription fact... 40 3e-07 ref|XP_004160399.1| PREDICTED: LOW QUALITY PROTEIN: membrane-bou... 40 3e-07 >ref|XP_002303727.1| predicted protein [Populus trichocarpa] gi|222841159|gb|EEE78706.1| predicted protein [Populus trichocarpa] Length = 509 Score = 43.5 bits (101), Expect(2) = 8e-08 Identities = 20/23 (86%), Positives = 22/23 (95%) Frame = +2 Query: 2 GYLLFSTLISVAVHEFGHAIAAA 70 GYLL STLISV+VHEFGH+IAAA Sbjct: 125 GYLLLSTLISVSVHEFGHSIAAA 147 Score = 37.7 bits (86), Expect(2) = 8e-08 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = +3 Query: 150 STHNSDGIHIEYFAIYIALLFPGALVA 230 S+ +S+GI EY AI++A+LFPGALVA Sbjct: 171 SSGSSEGIPTEYIAIFLAVLFPGALVA 197 >ref|XP_004145951.1| PREDICTED: membrane-bound transcription factor site-2 protease-like [Cucumis sativus] Length = 541 Score = 40.4 bits (93), Expect(2) = 3e-07 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = +2 Query: 2 GYLLFSTLISVAVHEFGHAIAAA 70 GY++ STLISVA HEFGHA AAA Sbjct: 132 GYIIISTLISVAFHEFGHAAAAA 154 Score = 38.9 bits (89), Expect(2) = 3e-07 Identities = 16/23 (69%), Positives = 21/23 (91%) Frame = +3 Query: 162 SDGIHIEYFAIYIALLFPGALVA 230 S+G+ +EY A++IALLFPGALVA Sbjct: 155 SEGVKLEYIAVFIALLFPGALVA 177 >ref|XP_004160399.1| PREDICTED: LOW QUALITY PROTEIN: membrane-bound transcription factor site-2 protease-like [Cucumis sativus] Length = 447 Score = 40.4 bits (93), Expect(2) = 3e-07 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = +2 Query: 2 GYLLFSTLISVAVHEFGHAIAAA 70 GY++ STLISVA HEFGHA AAA Sbjct: 38 GYIIISTLISVAFHEFGHAAAAA 60 Score = 38.9 bits (89), Expect(2) = 3e-07 Identities = 16/23 (69%), Positives = 21/23 (91%) Frame = +3 Query: 162 SDGIHIEYFAIYIALLFPGALVA 230 S+G+ +EY A++IALLFPGALVA Sbjct: 61 SEGVKLEYIAVFIALLFPGALVA 83