BLASTX nr result

ID: Coptis23_contig00028297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028297
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|2...   255   1e-65
ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resista...   254   2e-65
ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [S...   192   1e-46
ref|XP_002964767.1| hypothetical protein SELMODRAFT_406260 [Sela...   118   2e-24
ref|XP_002961699.1| ATP-binding cassette transporter [Selaginell...   117   4e-24

>ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|222857845|gb|EEE95392.1|
            predicted protein [Populus trichocarpa]
          Length = 1605

 Score =  255 bits (651), Expect = 1e-65
 Identities = 123/214 (57%), Positives = 156/214 (72%)
 Frame = +3

Query: 237  AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYSNPCTNYLGQ 416
            AGL+VSI LLFSGFVIYPSN+P YWKWLMYV P+HWANVSFC  QF +GY +PC+NYLGQ
Sbjct: 802  AGLLVSIFLLFSGFVIYPSNMPNYWKWLMYVNPVHWANVSFCRFQFIEGYPDPCSNYLGQ 861

Query: 417  LPFCDQYPTMTVGEAYLVFNQLSIDSKLTWLPHVVILGWTVIANLLALLGLKKIEFTGTS 596
            LPFCDQ+PTMTVG+AYL F++LS DSK  WLP+V++LGW   AN+L LLGLK IEF  TS
Sbjct: 862  LPFCDQFPTMTVGKAYLAFHELSEDSKRPWLPYVILLGWIAFANILTLLGLKNIEFVETS 921

Query: 597  PSLPQEKKTTVLSDYKKLNGSIFRSCNSYRKQSVGSSVSKHTMEQGSLSNDAQMEDGSDV 776
             SLP  +K+T + +Y++   S  +S  S+ + S     S +   Q S +   +M++   V
Sbjct: 922  QSLPYVRKSTTVYNYEEDADSESQSNYSFSQNSEKYDASTYPSPQNSGTIYRKMKNNGTV 981

Query: 777  DNWREEFRVNLEKSELAIPVKPVALRFLDLSFKR 878
            D W EEFRV++E++ L IPV+PV L F  LSF R
Sbjct: 982  DAWMEEFRVDIERNGLGIPVEPVTLLFEGLSFTR 1015


>ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resistance protein 7-like [Vitis
            vinifera]
          Length = 1538

 Score =  254 bits (650), Expect = 2e-65
 Identities = 121/212 (57%), Positives = 160/212 (75%)
 Frame = +3

Query: 237  AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYSNPCTNYLGQ 416
            +GL++SI LLFSGFVI+PSN+P YWKWL+YV PIH AN+ FC LQF+ GY++PC+NYLGQ
Sbjct: 732  SGLLISISLLFSGFVIFPSNVPAYWKWLIYVNPIHSANILFCRLQFNNGYTDPCSNYLGQ 791

Query: 417  LPFCDQYPTMTVGEAYLVFNQLSIDSKLTWLPHVVILGWTVIANLLALLGLKKIEFTGTS 596
            LPFCDQ+PTMTVG+AYL F +L+ +SK  WLP+ ++LGWTVIANLLALLGLKKIEFT  S
Sbjct: 792  LPFCDQFPTMTVGKAYLNFYELAENSKRPWLPYAILLGWTVIANLLALLGLKKIEFTEMS 851

Query: 597  PSLPQEKKTTVLSDYKKLNGSIFRSCNSYRKQSVGSSVSKHTMEQGSLSNDAQMEDGSDV 776
             SLP  K+T V+ ++ +   + F+S N+Y  QS   + S+++  + S S   +M + S  
Sbjct: 852  QSLPHLKRTPVIGNFVEDTDTEFQSFNTYSGQSSDYATSRYSRPKNSWSGHGKMNNSSRD 911

Query: 777  DNWREEFRVNLEKSELAIPVKPVALRFLDLSF 872
            + W EEF V+LE+  L IPV+PV L F +LSF
Sbjct: 912  EKWIEEFHVDLERKGLGIPVEPVTLLFENLSF 943


>ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [Sorghum bicolor]
            gi|241944069|gb|EES17214.1| hypothetical protein
            SORBIDRAFT_08g018460 [Sorghum bicolor]
          Length = 1532

 Score =  192 bits (488), Expect = 1e-46
 Identities = 99/217 (45%), Positives = 140/217 (64%), Gaps = 5/217 (2%)
 Frame = +3

Query: 237  AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYSNPCTNYLGQ 416
            AGLIVSI LLFSGFVI+PSNIP YWKWLM++ PI WAN+SFC+ QFS GY + C  YL Q
Sbjct: 708  AGLIVSIFLLFSGFVIFPSNIPQYWKWLMHINPIRWANMSFCDRQFSYGYKDFCNKYLNQ 767

Query: 417  LPFCDQYPTMTVGEAYLVFNQ-LSIDSKLTWLPHVVILGWTVIANLLALLGLKKIEFTGT 593
            L FC + P M  G+AYL++ + L+  S   W+P+++++GWT++A L+AL+ L K+EF+  
Sbjct: 768  LTFCKENPEMATGKAYLIYAELLTAVSVKPWVPYIILIGWTLLALLMALIFLNKVEFSQI 827

Query: 594  SPSLPQEKKTTVLSDYKKLNGSIFRSCNSYRKQSVGSSVSKHTMEQGSLSNDA----QME 761
            S S+PQ  +  +  +Y         S  SY + S+ S   K  +E   L++ +      +
Sbjct: 828  SQSVPQINQRKLSKNYLYDVEIYSSSTESYMEASIESGRYKF-LESPKLASSSTTVISED 886

Query: 762  DGSDVDNWREEFRVNLEKSELAIPVKPVALRFLDLSF 872
            +   V +WREEFRV ++  +L IPV  + L FLDLSF
Sbjct: 887  ENVSVRSWREEFRVKIDPEQLTIPVTLMTLSFLDLSF 923


>ref|XP_002964767.1| hypothetical protein SELMODRAFT_406260 [Selaginella moellendorffii]
            gi|300167000|gb|EFJ33605.1| hypothetical protein
            SELMODRAFT_406260 [Selaginella moellendorffii]
          Length = 1600

 Score =  118 bits (295), Expect = 2e-24
 Identities = 77/219 (35%), Positives = 106/219 (48%), Gaps = 7/219 (3%)
 Frame = +3

Query: 237  AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYSNPCTNYLGQ 416
            AGL+VS+ LLFSGFVI+PS  P YWKW++   P+ W NV FC  +F   Y   C ++  Q
Sbjct: 788  AGLVVSLGLLFSGFVIFPSLTPSYWKWMLSANPLRWGNVIFCMAEFLNRYHESCQDF-QQ 846

Query: 417  LPFCDQYPTMTVGEAYLVFNQLSIDSKLTWLPHVVILGWTVIANLLALLGLKKIEFTGTS 596
            L FC +YP + VG AYL F QL  + K   +   +I    +I  L + LGL K+ F+  S
Sbjct: 847  LLFCRKYPDLPVGRAYLEFFQLVSERKWMAISFAIIAASVLILALASYLGLSKVVFSEVS 906

Query: 597  PSLPQEKKTTVLSDYKKLNGSIFRSCNSYRKQSVGSSVSKHTMEQGSLSNDAQMEDGSDV 776
            PSLP E              S ++     +K      +S+ T      +     ++GS  
Sbjct: 907  PSLPSEPAR-----------SSYKQPEDKQKDISWDGLSRITEMSNLQTKTVWEKNGSTH 955

Query: 777  DNWREEFRVNLEK-------SELAIPVKPVALRFLDLSF 872
            D+  EE  + LE            IPVK   L F  +SF
Sbjct: 956  DD--EELGLGLELRGTGHQWENSHIPVKAATLSFHQVSF 992


>ref|XP_002961699.1| ATP-binding cassette transporter [Selaginella moellendorffii]
            gi|300170358|gb|EFJ36959.1| ATP-binding cassette
            transporter [Selaginella moellendorffii]
          Length = 1583

 Score =  117 bits (293), Expect = 4e-24
 Identities = 76/219 (34%), Positives = 106/219 (48%), Gaps = 7/219 (3%)
 Frame = +3

Query: 237  AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYSNPCTNYLGQ 416
            AGL+VS+ LLFSGFVI+PS  P YWKW++   P+ W NV FC  +F   Y   C ++  Q
Sbjct: 788  AGLVVSLGLLFSGFVIFPSLTPRYWKWMLSANPLRWGNVIFCMAEFLNRYHESCQDF-QQ 846

Query: 417  LPFCDQYPTMTVGEAYLVFNQLSIDSKLTWLPHVVILGWTVIANLLALLGLKKIEFTGTS 596
            L FC ++P + VG AYL F QL  + K   +   +I    +I  L + LGL K+ F+  S
Sbjct: 847  LLFCRKHPDLPVGRAYLEFFQLDSERKWMAISFAIIAASVLILALASYLGLSKVVFSEVS 906

Query: 597  PSLPQEKKTTVLSDYKKLNGSIFRSCNSYRKQSVGSSVSKHTMEQGSLSNDAQMEDGSDV 776
            PSLP E              S ++     +K      +S+ T      +     ++GS  
Sbjct: 907  PSLPSEPAR-----------SSYKQSEDKQKDISWDGLSRITEMSNLETKTLWEKNGSTY 955

Query: 777  DNWREEFRVNLEK-------SELAIPVKPVALRFLDLSF 872
            D+  EE  + LE            IPVK   L F  +SF
Sbjct: 956  DD--EELGLGLELRGTGHQWENSHIPVKAATLSFHQVSF 992


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