BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028295
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28722.3| unnamed protein product [Vitis vinifera]              172   2e-41
ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containi...   172   2e-41
ref|XP_002524751.1| pentatricopeptide repeat-containing protein,...   158   4e-37
ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-37
ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33

>emb|CBI28722.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = +1

Query: 1    SCYVALIQSRVLQKDTQGALHLFKEMKETKISKSCHEEFDMLVKGCAESGEAGVMAKLLQ 180
            SCY ALIQSRVLQKDT+GALH+FKEMKE KI +S H EF+MLVKGCAESGEAG+MAKLL 
Sbjct: 1136 SCYEALIQSRVLQKDTEGALHVFKEMKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLH 1195

Query: 181  EIKEGQRADCGVHEWNSVIHFFSKKRLMQDAEKALKKMRAL 303
            EIKE QR DCGVH+WN+VIHFF +KRLMQDAEKALKKMR+L
Sbjct: 1196 EIKEEQRVDCGVHDWNNVIHFFCRKRLMQDAEKALKKMRSL 1236


>ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Vitis vinifera]
          Length = 784

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = +1

Query: 1   SCYVALIQSRVLQKDTQGALHLFKEMKETKISKSCHEEFDMLVKGCAESGEAGVMAKLLQ 180
           SCY ALIQSRVLQKDT+GALH+FKEMKE KI +S H EF+MLVKGCAESGEAG+MAKLL 
Sbjct: 559 SCYEALIQSRVLQKDTEGALHVFKEMKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLH 618

Query: 181 EIKEGQRADCGVHEWNSVIHFFSKKRLMQDAEKALKKMRAL 303
           EIKE QR DCGVH+WN+VIHFF +KRLMQDAEKALKKMR+L
Sbjct: 619 EIKEEQRVDCGVHDWNNVIHFFCRKRLMQDAEKALKKMRSL 659


>ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535935|gb|EEF37594.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 787

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/101 (74%), Positives = 91/101 (90%)
 Frame = +1

Query: 1   SCYVALIQSRVLQKDTQGALHLFKEMKETKISKSCHEEFDMLVKGCAESGEAGVMAKLLQ 180
           SCY ALI+SRVL++DTQGALHLFKEMK+ KI ++ ++EF+MLVKGCA+ GEAG++AKLL+
Sbjct: 562 SCYGALIKSRVLEEDTQGALHLFKEMKDAKIPRAGNQEFEMLVKGCADDGEAGLLAKLLR 621

Query: 181 EIKEGQRADCGVHEWNSVIHFFSKKRLMQDAEKALKKMRAL 303
           EI+EGQ  D GVH+WN VIHFF KKRLMQDAEKALKKMR+L
Sbjct: 622 EIREGQTVDSGVHDWNYVIHFFCKKRLMQDAEKALKKMRSL 662


>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score =  157 bits (398), Expect = 6e-37
 Identities = 77/101 (76%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   SCYVALIQSRVLQKDTQGALHLFKEMKETKISKSCHEEFDMLVKGCAESGEAGVMAKLLQ 180
           S Y ALI+ RV+QKDT+ ALH+FKEMKE KI ++ H+EF+MLVKGCAE GEAG+MAKLLQ
Sbjct: 525 SSYNALIEFRVIQKDTKEALHIFKEMKEAKIPRTGHQEFEMLVKGCAEGGEAGLMAKLLQ 584

Query: 181 EIKEGQRADCGVHEWNSVIHFFSKKRLMQDAEKALKKMRAL 303
           EIKE Q AD GVH+WN+VIHFF KKRLMQDAEKALKKMR+L
Sbjct: 585 EIKEEQAADSGVHDWNNVIHFFCKKRLMQDAEKALKKMRSL 625


>ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Cucumis sativus]
           gi|449503826|ref|XP_004162196.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Cucumis sativus]
          Length = 796

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/101 (71%), Positives = 84/101 (83%)
 Frame = +1

Query: 1   SCYVALIQSRVLQKDTQGALHLFKEMKETKISKSCHEEFDMLVKGCAESGEAGVMAKLLQ 180
           SCY ALI SRVLQ D +GAL  F+EMKE KI +S H+EF  LV+  AE+ EAG+MAKLLQ
Sbjct: 571 SCYDALINSRVLQNDNKGALKFFQEMKEAKIPRSGHQEFRRLVEKSAENDEAGLMAKLLQ 630

Query: 181 EIKEGQRADCGVHEWNSVIHFFSKKRLMQDAEKALKKMRAL 303
           EIK+GQR D G+H+WN+VIHFF KKRLMQDAEKALKKMR+L
Sbjct: 631 EIKDGQRVDYGLHDWNNVIHFFCKKRLMQDAEKALKKMRSL 671