BLASTX nr result

ID: Coptis23_contig00028291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028291
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280011.2| PREDICTED: uncharacterized protein LOC100249...   161   6e-38
gb|AFK35111.1| unknown [Lotus japonicus]                              146   2e-33
ref|NP_001143831.1| hypothetical protein [Zea mays] gi|195627926...   144   1e-32
ref|NP_001172577.1| Os01g0763650 [Oryza sativa Japonica Group] g...   144   1e-32
dbj|BAJ90441.1| predicted protein [Hordeum vulgare subsp. vulgar...   143   2e-32

>ref|XP_002280011.2| PREDICTED: uncharacterized protein LOC100249838 [Vitis vinifera]
           gi|296082204|emb|CBI21209.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  161 bits (408), Expect = 6e-38
 Identities = 87/152 (57%), Positives = 108/152 (71%), Gaps = 5/152 (3%)
 Frame = -1

Query: 558 ISREGAAS--LLNPGVHCFNCKQSTRSFIGTTHFQPRGIGKNGYTRYPFYPRIQQQEHQV 385
           ++ EGA    L + GV  FN K +++  I     +P  I     + Y   P+I  Q    
Sbjct: 2   VAVEGALGKQLFSNGVQNFNSKLASKPQIQVP--RPETITVYQTSFYLRVPKISTQHRDA 59

Query: 384 ---YAIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPGSTLPPDLARFRT 214
              YA+RRRR+  QT+TYVL+EPGK+EEFVS+EELK+RLK WLENWPG  LPPDLA+F+T
Sbjct: 60  VKSYAMRRRRAYSQTETYVLMEPGKDEEFVSQEELKARLKGWLENWPGKALPPDLAKFQT 119

Query: 213 IDDAVSHLVKSVCELEIDGDVGSIQWYEVRLE 118
           IDDAV +LVK+VCELEIDGDVGSIQWYE+RLE
Sbjct: 120 IDDAVMYLVKAVCELEIDGDVGSIQWYEIRLE 151


>gb|AFK35111.1| unknown [Lotus japonicus]
          Length = 151

 Score =  146 bits (369), Expect = 2e-33
 Identities = 68/104 (65%), Positives = 86/104 (82%)
 Frame = -1

Query: 429 RYPFYPRIQQQEHQVYAIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPG 250
           R P    + +   +++A+RRRR+N +T+TYVL+EPG++E+FVSEEELK+ LK  L NWPG
Sbjct: 48  RLPQIAGVSKSNTKLFALRRRRANERTETYVLLEPGEDEKFVSEEELKATLKERLTNWPG 107

Query: 249 STLPPDLARFRTIDDAVSHLVKSVCELEIDGDVGSIQWYEVRLE 118
             LPPDLAR+ TID+AVS LV+SVCELEIDGDVGS+QWYEVRLE
Sbjct: 108 KALPPDLARYETIDEAVSFLVRSVCELEIDGDVGSVQWYEVRLE 151


>ref|NP_001143831.1| hypothetical protein [Zea mays] gi|195627926|gb|ACG35793.1|
           hypothetical protein [Zea mays]
           gi|223948371|gb|ACN28269.1| unknown [Zea mays]
           gi|414880396|tpg|DAA57527.1| TPA: hypothetical protein
           ZEAMMB73_956194 [Zea mays]
          Length = 171

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/99 (65%), Positives = 84/99 (84%)
 Frame = -1

Query: 414 PRIQQQEHQVYAIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPGSTLPP 235
           PR++    QV A RRRR+++Q+DTYVL+EPG +E FVS EEL+ RLK WL+NWP  TLPP
Sbjct: 73  PRMRGHGEQVCATRRRRADIQSDTYVLMEPGMDEAFVSREELEERLKGWLKNWPRDTLPP 132

Query: 234 DLARFRTIDDAVSHLVKSVCELEIDGDVGSIQWYEVRLE 118
           DLARF T+D+AVS+LV+SVC LEIDGDVGS++WY+V+L+
Sbjct: 133 DLARFGTVDEAVSYLVRSVCVLEIDGDVGSVEWYQVQLD 171


>ref|NP_001172577.1| Os01g0763650 [Oryza sativa Japonica Group]
           gi|57899557|dbj|BAD87136.1| unknown protein [Oryza
           sativa Japonica Group] gi|57900366|dbj|BAD87356.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|222619293|gb|EEE55425.1| hypothetical protein
           OsJ_03554 [Oryza sativa Japonica Group]
           gi|255673708|dbj|BAH91307.1| Os01g0763650 [Oryza sativa
           Japonica Group]
          Length = 151

 Score =  144 bits (362), Expect = 1e-32
 Identities = 64/90 (71%), Positives = 81/90 (90%)
 Frame = -1

Query: 387 VYAIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPGSTLPPDLARFRTID 208
           V A RRRR+++Q++TYVL+EPG+ EEFVS+EEL+ RL+ WLE WPG  LPPDLARF T+D
Sbjct: 62  VCAARRRRADIQSETYVLMEPGEEEEFVSKEELEGRLRGWLERWPGGELPPDLARFDTVD 121

Query: 207 DAVSHLVKSVCELEIDGDVGSIQWYEVRLE 118
           DAVS+LV+SVCELEIDG+VGS+QWY+V+LE
Sbjct: 122 DAVSYLVRSVCELEIDGEVGSVQWYQVQLE 151


>dbj|BAJ90441.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326520968|dbj|BAJ92847.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 151

 Score =  143 bits (361), Expect = 2e-32
 Identities = 62/88 (70%), Positives = 79/88 (89%)
 Frame = -1

Query: 381 AIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPGSTLPPDLARFRTIDDA 202
           A RRRR+++Q+DTYVL+EPG  EEFVS+EEL+ RL+ WLE WPG  LPPDLARF T+DDA
Sbjct: 64  AARRRRADIQSDTYVLLEPGMEEEFVSKEELEERLRGWLERWPGGALPPDLARFDTVDDA 123

Query: 201 VSHLVKSVCELEIDGDVGSIQWYEVRLE 118
           VS+LV+SVCELE+DG+VGS+QWY+V++E
Sbjct: 124 VSYLVRSVCELEVDGEVGSVQWYQVQIE 151


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