BLASTX nr result

ID: Coptis23_contig00028276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028276
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24702.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002274969.1| PREDICTED: uncharacterized protein LOC100250...   193   1e-47
ref|XP_002524862.1| conserved hypothetical protein [Ricinus comm...   183   1e-44
ref|XP_002330694.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-44
dbj|BAD52604.1| putative SAC domain protein 9 [Oryza sativa Japo...   176   2e-42

>emb|CBI24702.3| unnamed protein product [Vitis vinifera]
          Length = 1562

 Score =  193 bits (490), Expect = 1e-47
 Identities = 96/130 (73%), Positives = 110/130 (84%), Gaps = 4/130 (3%)
 Frame = -3

Query: 380 LRDTSXXXVTLDTSEVYIVVSLSIRKDTQVIYVDPTTGGLCYNGR----VFTSEDEAFNF 213
           LRDTS   VTLDTSEVYI+VSLS R DTQVIY+DPTTG LCY+G+    VF SE EA ++
Sbjct: 28  LRDTSVVVVTLDTSEVYIIVSLSSRTDTQVIYIDPTTGALCYSGKLGYDVFRSEKEALDY 87

Query: 212 VTNGSKCLCKSVTYGKAILGYSALGSFGILLVATKLSATIPNLPGGGSVYTVLESQWIKI 33
           +TNGS  LCKSVTY +AILGYSA+GSFG+LLVATKL+A+IPNLPGGG VYTV ESQW+K+
Sbjct: 88  ITNGSSWLCKSVTYARAILGYSAVGSFGLLLVATKLTASIPNLPGGGCVYTVAESQWVKV 147

Query: 32  PLQNPQPLGK 3
            LQNPQP GK
Sbjct: 148 SLQNPQPQGK 157


>ref|XP_002274969.1| PREDICTED: uncharacterized protein LOC100250760 [Vitis vinifera]
          Length = 1656

 Score =  193 bits (490), Expect = 1e-47
 Identities = 96/130 (73%), Positives = 110/130 (84%), Gaps = 4/130 (3%)
 Frame = -3

Query: 380 LRDTSXXXVTLDTSEVYIVVSLSIRKDTQVIYVDPTTGGLCYNGR----VFTSEDEAFNF 213
           LRDTS   VTLDTSEVYI+VSLS R DTQVIY+DPTTG LCY+G+    VF SE EA ++
Sbjct: 22  LRDTSVVVVTLDTSEVYIIVSLSSRTDTQVIYIDPTTGALCYSGKLGYDVFRSEKEALDY 81

Query: 212 VTNGSKCLCKSVTYGKAILGYSALGSFGILLVATKLSATIPNLPGGGSVYTVLESQWIKI 33
           +TNGS  LCKSVTY +AILGYSA+GSFG+LLVATKL+A+IPNLPGGG VYTV ESQW+K+
Sbjct: 82  ITNGSSWLCKSVTYARAILGYSAVGSFGLLLVATKLTASIPNLPGGGCVYTVAESQWVKV 141

Query: 32  PLQNPQPLGK 3
            LQNPQP GK
Sbjct: 142 SLQNPQPQGK 151


>ref|XP_002524862.1| conserved hypothetical protein [Ricinus communis]
           gi|223535825|gb|EEF37486.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1635

 Score =  183 bits (465), Expect = 1e-44
 Identities = 96/140 (68%), Positives = 111/140 (79%), Gaps = 4/140 (2%)
 Frame = -3

Query: 410 MRSPAKEVGGLRDTSXXXVTLDTSEVYIVVSLSIRKDTQVIYVDPTTGGLCYNGR----V 243
           M SP   VGG R TS   VTLD+ EVYIV SLS R DTQVIY+DPTTG L Y+G+    V
Sbjct: 1   MESP---VGGSRHTSVVVVTLDSGEVYIVASLSSRTDTQVIYIDPTTGALRYSGKLGYDV 57

Query: 242 FTSEDEAFNFVTNGSKCLCKSVTYGKAILGYSALGSFGILLVATKLSATIPNLPGGGSVY 63
           F SEDEA +++TNGS+ LC+S TY +AILGY+ALGSFG+LLVATKL+A+IPNLPGGG VY
Sbjct: 58  FKSEDEALDYITNGSRWLCRSTTYARAILGYAALGSFGLLLVATKLTASIPNLPGGGCVY 117

Query: 62  TVLESQWIKIPLQNPQPLGK 3
           TV ESQWIKI LQNP+  GK
Sbjct: 118 TVTESQWIKISLQNPEQQGK 137


>ref|XP_002330694.1| predicted protein [Populus trichocarpa] gi|222872298|gb|EEF09429.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  181 bits (459), Expect = 5e-44
 Identities = 94/133 (70%), Positives = 107/133 (80%), Gaps = 4/133 (3%)
 Frame = -3

Query: 389 VGGLRDTSXXXVTLDTSEVYIVVSLSIRKDTQVIYVDPTTGGLCYNGR----VFTSEDEA 222
           VGG R TS    TLD+ EVYI+ SLS R DTQVIYVDPTTG L ++G+    VF SEDEA
Sbjct: 11  VGGSRLTSVVVATLDSGEVYIIASLSSRTDTQVIYVDPTTGLLRFSGKLGFDVFKSEDEA 70

Query: 221 FNFVTNGSKCLCKSVTYGKAILGYSALGSFGILLVATKLSATIPNLPGGGSVYTVLESQW 42
            N++TNGS+ LC+S T  KAILGY+ALGSFG+LLVATKL+A+IPNLPGGGSVYTV ESQW
Sbjct: 71  LNYITNGSRWLCRSTTNAKAILGYAALGSFGLLLVATKLTASIPNLPGGGSVYTVTESQW 130

Query: 41  IKIPLQNPQPLGK 3
           IKI LQNPQ  GK
Sbjct: 131 IKISLQNPQQQGK 143


>dbj|BAD52604.1| putative SAC domain protein 9 [Oryza sativa Japonica Group]
           gi|53792122|dbj|BAD52755.1| putative SAC domain protein
           9 [Oryza sativa Japonica Group]
           gi|222618412|gb|EEE54544.1| hypothetical protein
           OsJ_01717 [Oryza sativa Japonica Group]
          Length = 1643

 Score =  176 bits (445), Expect = 2e-42
 Identities = 92/136 (67%), Positives = 103/136 (75%), Gaps = 4/136 (2%)
 Frame = -3

Query: 401 PAKEVGGLRDTSXXXVTLDTSEVYIVVSLSIRKDTQVIYVDPTTGGLCYNGR----VFTS 234
           PA   G  RDTS   V LDTSEVYIV SLS RKDTQVIYVDPTTG L Y G+    +F S
Sbjct: 14  PANPRGRPRDTSVVVVVLDTSEVYIVASLSTRKDTQVIYVDPTTGYLHYLGKHGEDLFDS 73

Query: 233 EDEAFNFVTNGSKCLCKSVTYGKAILGYSALGSFGILLVATKLSATIPNLPGGGSVYTVL 54
           E  A N++TNGSK LCKS TY KA+LGY+ LGS+ +LLVAT+LSAT+P LPGGG +YTV 
Sbjct: 74  EAAALNYITNGSKILCKSTTYSKAVLGYAVLGSYALLLVATQLSATVPTLPGGGCIYTVA 133

Query: 53  ESQWIKIPLQNPQPLG 6
           ESQWIKI LQNPQ  G
Sbjct: 134 ESQWIKIQLQNPQAQG 149


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