BLASTX nr result

ID: Coptis23_contig00028269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028269
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264...    64   1e-08
ref|XP_002321708.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|1...    57   1e-06
gb|AFK48728.1| unknown [Medicago truncatula]                           57   2e-06

>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
           gi|147789866|emb|CAN73869.1| hypothetical protein
           VITISV_001275 [Vitis vinifera]
           gi|297734439|emb|CBI15686.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = -2

Query: 372 SLRTELAKKNKYLKLLIDQLRELITDISTWQSPC 271
           +LR ELA KNKYLKLLIDQLR+LITDISTWQSPC
Sbjct: 139 NLRKELADKNKYLKLLIDQLRDLITDISTWQSPC 172


>ref|XP_002321708.1| predicted protein [Populus trichocarpa] gi|222868704|gb|EEF05835.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -2

Query: 372 SLRTELAKKNKYLKLLIDQLRELITDISTWQSPC 271
           SLR ELAKKN Y+KLLIDQLRE+ITDISTWQ+PC
Sbjct: 142 SLRKELAKKNTYVKLLIDQLREIITDISTWQTPC 175


>ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis]
           gi|223550283|gb|EEF51770.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 196

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -2

Query: 372 SLRTELAKKNKYLKLLIDQLRELITDISTWQSPC 271
           +LR EL  KN YLKLLIDQLR+LITDISTWQSPC
Sbjct: 161 NLRKELFNKNAYLKLLIDQLRDLITDISTWQSPC 194


>ref|XP_002318134.1| predicted protein [Populus trichocarpa] gi|118486707|gb|ABK95190.1|
           unknown [Populus trichocarpa]
           gi|222858807|gb|EEE96354.1| predicted protein [Populus
           trichocarpa]
          Length = 185

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 372 SLRTELAKKNKYLKLLIDQLRELITDISTWQSP 274
           +LR ELAKKN Y+KLLIDQLRELI DISTWQ P
Sbjct: 150 NLRKELAKKNTYVKLLIDQLRELIADISTWQGP 182


>gb|AFK48728.1| unknown [Medicago truncatula]
          Length = 179

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 372 SLRTELAKKNKYLKLLIDQLRELITDISTWQSP 274
           SLR EL  KN +LK+LIDQLRELITDISTWQSP
Sbjct: 144 SLRKELGNKNLHLKILIDQLRELITDISTWQSP 176


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