BLASTX nr result

ID: Coptis23_contig00028257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028257
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336707.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_003600291.1| Zinc finger MYM-type protein [Medicago trunc...    96   3e-18
ref|XP_003590441.1| Zinc finger MYM-type protein [Medicago trunc...    94   1e-17
ref|XP_003602139.1| 52 kDa repressor of the inhibitor of the pro...    93   2e-17
ref|XP_003598405.1| 52 kDa repressor of the inhibitor of the pro...    93   2e-17

>ref|XP_002336707.1| predicted protein [Populus trichocarpa] gi|222836562|gb|EEE74969.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   KKVNDGKKCAFLQHKG-GPCSPHRSATLSCENFMNSSRHIDNMFRIQCQEELANNRLLVK 177
           KKVNDG++CAFL H G GP S HR AT   EN  N S HI+ + + Q  +E+ NNRL +K
Sbjct: 85  KKVNDGERCAFLTHMGKGPNSAHRFATRCLENLKNQSCHIEKVVKRQTTQEILNNRLRIK 144

Query: 178 AIVQCIQLLALRGISFRGHDESTKSKNSGNFKKVLKFAAMLNEK 309
           A +  ++ L  +  +F+GHDE  +SKN GNF ++++  A  NE+
Sbjct: 145 ASIDIVRWLTFQACAFKGHDERPESKNRGNFLEMMELLASYNEQ 188


>ref|XP_003600291.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355489339|gb|AES70542.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 722

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   KKVNDGKKCAFLQHKG-GPCSPHRSATLSCENFMNSSRHIDNMFRIQCQEELANNRLLVK 177
           K+V DGK CAF++H G  PCS H +A  +C + +N   HI + F+ Q   ++ NNRL +K
Sbjct: 123 KRVRDGKNCAFIKHIGKDPCSHHNNAVKACNDLLNQRAHIRHGFQKQSSSQIMNNRLRLK 182

Query: 178 AIVQCIQLLALRGISFRGHDESTKSKNSGNFKKVLKFAAMLNEK 309
           A +  ++ L L+  +FRGHDE+  SKN GNF ++LK  A  N++
Sbjct: 183 ASIDVVRWLTLQTCAFRGHDENVISKNQGNFLELLKLLASYNDE 226


>ref|XP_003590441.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355479489|gb|AES60692.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 491

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 39/104 (37%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   KKVNDGKKCAFLQHKG-GPCSPHRSATLSCENFMNSSRHIDNMFRIQCQEELANNRLLVK 177
           +KV +GK C+FL+H G  PCSPH +A  +C++F+N   H+ N+  +Q   ++ NNR+ +K
Sbjct: 62  RKVRNGKVCSFLKHIGKDPCSPHNNAMKACQDFLNQDGHLRNVIEVQSSSQILNNRICLK 121

Query: 178 AIVQCIQLLALRGISFRGHDESTKSKNSGNFKKVLKFAAMLNEK 309
           A +  ++ L ++  +F GH E ++ +N GNF ++LK  A  N++
Sbjct: 122 ASIDIVRWLTIQACAFTGHCEESELRNQGNFLELLKLLAFYNDE 165


>ref|XP_003602139.1| 52 kDa repressor of the inhibitor of the protein kinase [Medicago
           truncatula] gi|355491187|gb|AES72390.1| 52 kDa repressor
           of the inhibitor of the protein kinase [Medicago
           truncatula]
          Length = 785

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   KKVNDGKKCAFLQHKG-GPCSPHRSATLSCENFMNSSRHIDNMFRIQCQEELANNRLLVK 177
           +KV +G+ C+FL+H G  P SPH +A  +C++F+N   H+ N+  +Q   ++ NNRL +K
Sbjct: 124 RKVRNGENCSFLKHIGKDPRSPHNNAMKACQDFLNQDGHLRNVIEVQSSSQILNNRLCLK 183

Query: 178 AIVQCIQLLALRGISFRGHDESTKSKNSGNFKKVLKFAAMLNEK 309
             +  ++ L ++  +FRGH E  KS+N GNF ++LK  A  N++
Sbjct: 184 TSIDTVRWLTIQACAFRGHREGNKSRNQGNFLELLKLLASYNDE 227


>ref|XP_003598405.1| 52 kDa repressor of the inhibitor of the protein kinase [Medicago
           truncatula] gi|358348356|ref|XP_003638213.1| 52 kDa
           repressor of the inhibitor of the protein kinase
           [Medicago truncatula] gi|355487453|gb|AES68656.1| 52 kDa
           repressor of the inhibitor of the protein kinase
           [Medicago truncatula] gi|355504148|gb|AES85351.1| 52 kDa
           repressor of the inhibitor of the protein kinase
           [Medicago truncatula]
          Length = 822

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   KKVNDGKKCAFLQHKG-GPCSPHRSATLSCENFMNSSRHIDNMFRIQCQEELANNRLLVK 177
           +KV +G+ C+FL+H G  P SPH +A  +C++F+N   H+ N+  +Q   ++ NNRL +K
Sbjct: 161 RKVRNGENCSFLKHIGKDPRSPHNNAMKACQDFLNQDGHLRNVIEVQSSSQILNNRLCLK 220

Query: 178 AIVQCIQLLALRGISFRGHDESTKSKNSGNFKKVLKFAAMLNEK 309
             +  ++ L ++  +FRGH E  KS+N GNF ++LK  A  N++
Sbjct: 221 TSIDTVRWLTIQACAFRGHREGNKSRNQGNFLELLKLLASYNDE 264


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