BLASTX nr result

ID: Coptis23_contig00028252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028252
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus co...   307   1e-81
ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, ...   295   6e-78
ref|XP_004166131.1| PREDICTED: probable alanine--tRNA ligase, ch...   283   2e-74
ref|XP_004139952.1| PREDICTED: probable alanine--tRNA ligase, ch...   283   2e-74
ref|XP_003523490.1| PREDICTED: probable alanyl-tRNA synthetase, ...   283   4e-74

>ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus communis]
           gi|223525858|gb|EEF28289.1| alanyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 815

 Score =  307 bits (787), Expect = 1e-81
 Identities = 152/244 (62%), Positives = 189/244 (77%)
 Frame = +1

Query: 49  DGKGNLEGAFVPEIAGKVIELSANINSDVGTRTARIYXXXXXXXXXXXXXXXXGEKLLDQ 228
           DGKGNL+GAF+P IA KVIELS +I+SDV  R +RI                 GEKLLDQ
Sbjct: 231 DGKGNLDGAFIPAIAEKVIELSVHIDSDVKARASRILEELQREEFRFVQTLERGEKLLDQ 290

Query: 229 LLNTALLSAQESGTAPCLSGDNAFILYDRYGFPVEITAEVAEERGVRVDMNGFDIEMEKR 408
           +L  AL S Q+ G  PCLSG + F+LYD YGFPVEIT EVAEE GV++DM+GFDIEMEK+
Sbjct: 291 MLEDALSSGQKKGVIPCLSGKDVFLLYDTYGFPVEITTEVAEEHGVKIDMDGFDIEMEKQ 350

Query: 409 RQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTRAVIECLLVSGKREVKVSEGKD 588
           R+ SQ AH V+KL+V D  + ++ V DTEFLGYDTLS RAVI+ LLV+GK  ++V EG +
Sbjct: 351 RRQSQAAHNVIKLTVEDGGDLSENVSDTEFLGYDTLSARAVIDSLLVNGKPVIQVPEGSE 410

Query: 589 VEILLNRTPFYAESGGQIGDNGYIYVLEAESKRKAVVEIRDVQKSLGSIYVHKGTVKEGD 768
           VEILLN+TPFYAESGGQIGD+G++YV E ESK +A+VEI+DVQKSLG+++VHKGT++EG 
Sbjct: 411 VEILLNKTPFYAESGGQIGDHGFLYVTEGESKPRAIVEIKDVQKSLGNVFVHKGTIREGL 470

Query: 769 IEEG 780
           +E G
Sbjct: 471 LEVG 474


>ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic [Vitis
            vinifera] gi|297744517|emb|CBI37779.3| unnamed protein
            product [Vitis vinifera]
          Length = 1006

 Score =  295 bits (756), Expect = 6e-78
 Identities = 148/244 (60%), Positives = 186/244 (76%)
 Frame = +1

Query: 49   DGKGNLEGAFVPEIAGKVIELSANINSDVGTRTARIYXXXXXXXXXXXXXXXXGEKLLDQ 228
            DG+GN EGAF+P IA KVIELS+ I+ DV +R  RI                 GEKLLD+
Sbjct: 422  DGRGNPEGAFLPTIAEKVIELSSQIDPDVKSRAPRILEELKREELRFVQTLERGEKLLDE 481

Query: 229  LLNTALLSAQESGTAPCLSGDNAFILYDRYGFPVEITAEVAEERGVRVDMNGFDIEMEKR 408
            +L  ALL++ E+G  P LSG + F+LYD YGFPVEIT E AEERGV +DMNGF+IEME +
Sbjct: 482  MLANALLNSNENGNGPILSGKDVFLLYDTYGFPVEITTEAAEERGVGIDMNGFEIEMENQ 541

Query: 409  RQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTRAVIECLLVSGKREVKVSEGKD 588
            R+ SQ AH  VKL+VG+ ++ T+ + DTEFLGY+TLST+AVIE LLV+G   ++VSEG D
Sbjct: 542  RRQSQAAHNAVKLAVGNSADLTENISDTEFLGYETLSTKAVIEGLLVNGNPVIQVSEGSD 601

Query: 589  VEILLNRTPFYAESGGQIGDNGYIYVLEAESKRKAVVEIRDVQKSLGSIYVHKGTVKEGD 768
            VEI LNRTPFYAESGGQIGD+G++YV E  +++ AVVEI+DVQKSLG+I+VHKGT+KEG 
Sbjct: 602  VEIFLNRTPFYAESGGQIGDHGFLYVNEDRNQKNAVVEIKDVQKSLGNIFVHKGTIKEGV 661

Query: 769  IEEG 780
            +E G
Sbjct: 662  VEVG 665


>ref|XP_004166131.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic-like [Cucumis
            sativus]
          Length = 956

 Score =  283 bits (725), Expect = 2e-74
 Identities = 139/244 (56%), Positives = 180/244 (73%)
 Frame = +1

Query: 49   DGKGNLEGAFVPEIAGKVIELSANINSDVGTRTARIYXXXXXXXXXXXXXXXXGEKLLDQ 228
            DG+GN++GAF P IA KVI LS +I+ DV  R  RI                 GEKLL++
Sbjct: 372  DGRGNIDGAFTPVIAEKVIALSNHIDEDVKGRAGRILEELKREELRFVQTLERGEKLLEE 431

Query: 229  LLNTALLSAQESGTAPCLSGDNAFILYDRYGFPVEITAEVAEERGVRVDMNGFDIEMEKR 408
            +L  AL SA + G  PCL+G +AF+LYD YGFPVEI+ EVA+ERGV VDM GFDIEM+ +
Sbjct: 432  MLADALASANDGGRIPCLAGKDAFLLYDTYGFPVEISTEVAQERGVVVDMEGFDIEMDNQ 491

Query: 409  RQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTRAVIECLLVSGKREVKVSEGKD 588
            R+ SQ AH VVKL VG+ ++  + + DTEFLGYDTLS +A++E L+V+G   ++VSEG D
Sbjct: 492  RRQSQAAHNVVKLEVGEGADIMENISDTEFLGYDTLSAKAIVESLIVNGNPVLQVSEGND 551

Query: 589  VEILLNRTPFYAESGGQIGDNGYIYVLEAESKRKAVVEIRDVQKSLGSIYVHKGTVKEGD 768
            VE+LLNRTPFYAESGGQIGD+G+IY+ E E+ +  VVE++DVQKS GSI+VHKG +K+G 
Sbjct: 552  VEVLLNRTPFYAESGGQIGDHGFIYISEGENSQNVVVEVKDVQKSAGSIFVHKGIIKQGI 611

Query: 769  IEEG 780
            +E G
Sbjct: 612  LEVG 615


>ref|XP_004139952.1| PREDICTED: probable alanine--tRNA ligase, chloroplastic-like [Cucumis
            sativus]
          Length = 956

 Score =  283 bits (725), Expect = 2e-74
 Identities = 139/244 (56%), Positives = 180/244 (73%)
 Frame = +1

Query: 49   DGKGNLEGAFVPEIAGKVIELSANINSDVGTRTARIYXXXXXXXXXXXXXXXXGEKLLDQ 228
            DG+GN++GAF P IA KVI LS +I+ DV  R  RI                 GEKLL++
Sbjct: 372  DGRGNIDGAFTPVIAEKVIALSNHIDEDVKGRAGRILEELKREELRFVQTLERGEKLLEE 431

Query: 229  LLNTALLSAQESGTAPCLSGDNAFILYDRYGFPVEITAEVAEERGVRVDMNGFDIEMEKR 408
            +L  AL SA + G  PCL+G +AF+LYD YGFPVEI+ EVA+ERGV VDM GFDIEM+ +
Sbjct: 432  MLADALASANDGGRIPCLAGKDAFLLYDTYGFPVEISTEVAQERGVVVDMEGFDIEMDNQ 491

Query: 409  RQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTRAVIECLLVSGKREVKVSEGKD 588
            R+ SQ AH VVKL VG+ ++  + + DTEFLGYDTLS +A++E L+V+G   ++VSEG D
Sbjct: 492  RRQSQAAHNVVKLEVGEGADIMENISDTEFLGYDTLSAKAIVESLIVNGNPVLQVSEGND 551

Query: 589  VEILLNRTPFYAESGGQIGDNGYIYVLEAESKRKAVVEIRDVQKSLGSIYVHKGTVKEGD 768
            VE+LLNRTPFYAESGGQIGD+G+IY+ E E+ +  VVE++DVQKS GSI+VHKG +K+G 
Sbjct: 552  VEVLLNRTPFYAESGGQIGDHGFIYISEGENSQNVVVEVKDVQKSAGSIFVHKGIIKQGI 611

Query: 769  IEEG 780
            +E G
Sbjct: 612  LEVG 615


>ref|XP_003523490.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
            [Glycine max]
          Length = 957

 Score =  283 bits (723), Expect = 4e-74
 Identities = 137/244 (56%), Positives = 185/244 (75%)
 Frame = +1

Query: 49   DGKGNLEGAFVPEIAGKVIELSANINSDVGTRTARIYXXXXXXXXXXXXXXXXGEKLLDQ 228
            DG+G+LEGAF+P IA KV+ELS +I++DV  + +RI+                GEKLL++
Sbjct: 373  DGRGDLEGAFLPIIAEKVVELSTHIDADVMNKASRIFEELKREELRFVQTLERGEKLLEE 432

Query: 229  LLNTALLSAQESGTAPCLSGDNAFILYDRYGFPVEITAEVAEERGVRVDMNGFDIEMEKR 408
             L+ AL SA+ +GT PCL+G++ F+LYD YG+P+EIT EVAEERGV +DM+GFDIEMEK+
Sbjct: 433  KLSDALSSAERNGTVPCLAGEDVFLLYDTYGYPMEITKEVAEERGVSIDMDGFDIEMEKQ 492

Query: 409  RQNSQEAHTVVKLSVGDVSEFTDRVPDTEFLGYDTLSTRAVIECLLVSGKREVKVSEGKD 588
            R+ SQ AH  VKL + +     + VPDTEF+GYD L  +A+IE L+V+G    +VSEG +
Sbjct: 493  RRQSQAAHNTVKLDIENGENIAENVPDTEFIGYDNLHCKAMIESLMVNGNPAPQVSEGSN 552

Query: 589  VEILLNRTPFYAESGGQIGDNGYIYVLEAESKRKAVVEIRDVQKSLGSIYVHKGTVKEGD 768
            VE+LLN+TPFYAESGGQIGD+GY+Y+ + E++ KAVVEI DVQKS G+I+VHKGTV++G 
Sbjct: 553  VEVLLNKTPFYAESGGQIGDHGYLYISKGENQPKAVVEILDVQKSFGNIFVHKGTVQKGV 612

Query: 769  IEEG 780
            +E G
Sbjct: 613  VEVG 616


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