BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028245
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598875.1| Crossover junction endonuclease MUS81 [Medic...   407   e-111
ref|XP_003538223.1| PREDICTED: crossover junction endonuclease M...   407   e-111
emb|CBI17741.3| unnamed protein product [Vitis vinifera]              405   e-110
ref|XP_002268085.2| PREDICTED: crossover junction endonuclease M...   393   e-107
ref|XP_004166267.1| PREDICTED: LOW QUALITY PROTEIN: crossover ju...   391   e-106

>ref|XP_003598875.1| Crossover junction endonuclease MUS81 [Medicago truncatula]
            gi|355487923|gb|AES69126.1| Crossover junction
            endonuclease MUS81 [Medicago truncatula]
          Length = 735

 Score =  407 bits (1046), Expect = e-111
 Identities = 243/453 (53%), Positives = 295/453 (65%), Gaps = 44/453 (9%)
 Frame = +3

Query: 6    TEEQDLSQKGKRKTKGPRRYVPQKNSVAYALLITLYRGAANGIEFMKKQELIDAAEASGL 185
            TE  D ++KGK KTKG +RY+PQ+NSVAYALLITLYRG +NG EFM+KQELIDAAEASGL
Sbjct: 142  TEPDDSTKKGK-KTKGTKRYMPQRNSVAYALLITLYRGTSNGNEFMRKQELIDAAEASGL 200

Query: 186  SRVPIAPELGKGRQGQFVNSPKEWYSGWNAMSTLITKGLVAKSSNPAKYMLTQEGREAAR 365
            SR PIA E GKG+ G F +SP++WYSGW+ M TLI+KGLV KSS PAKYMLT+EG+EAA 
Sbjct: 201  SRAPIASEKGKGKAGHFGSSPQDWYSGWSCMKTLISKGLVVKSSCPAKYMLTEEGKEAAC 260

Query: 366  DCLSRSGLADSVDHSDTIGNFQSKDIQNASDSE-SDPDMSCEMAIPVNMSRQKKSVAIPS 542
            DCL RSG+A+S+D S ++      D QN+ D E S  D+  E+  P+N  RQKK + +P 
Sbjct: 261  DCLKRSGMAESLDKSASVEISVHMDKQNSLDIEVSAYDLESEVTSPLN--RQKKPLDVPL 318

Query: 543  NSLEK-----------------------EDRVDVLLPA------GKRTRGKDPHA--TLN 629
            +SLE+                          V  L PA       ++  G  P +   +N
Sbjct: 319  DSLERFTNMGYSKEQIISAFKEVSRSHPNKDVSSLWPAVLCQLREEQVYGSQPESQILMN 378

Query: 630  FDNVKNTGRGGNVLEENVRISSGGARHGLXXXXXXXXXQCS-----FTVRACSSSSNPIH 794
             + V N  +G    +     SS G               CS     F++RACSS+ N I 
Sbjct: 379  ANTVVNDPKGPIGKQSRTLSSSFGGN---------VANLCSPDIPPFSMRACSSAGNTIQ 429

Query: 795  NSLAHDATHANTNVLMVPPLRLGERFGDVYEVILILDDREQFVNSNKGHRSRKLIENIRI 974
                 D   +  N+L VPPL  GERF D YEVILILDDREQF  + KG RSRK+IENI  
Sbjct: 430  KP-NKDEIKSKMNILSVPPLSFGERFEDAYEVILILDDREQF--ATKGSRSRKIIENICS 486

Query: 975  EFKIQLEVRRLPVGDAIWIARHRELGSEYVLDFIVERKGVDDLRCSIKDNRYRDQKLRLV 1154
             FKIQ+EVRRLPVGD IWIARH+ LGSEYVLDFIVERK +DDLR SI+DNRY+DQKLRLV
Sbjct: 487  NFKIQIEVRRLPVGDGIWIARHKTLGSEYVLDFIVERKKIDDLRSSIRDNRYKDQKLRLV 546

Query: 1155 -------RCGLQKLIYVVEGDPNACDAAETIKT 1232
                   RCGL+KLIY+VEGDPN+ +AAE+IKT
Sbjct: 547  VSIPSKIRCGLKKLIYLVEGDPNSSEAAESIKT 579


>ref|XP_003538223.1| PREDICTED: crossover junction endonuclease MUS81-like [Glycine max]
          Length = 643

 Score =  407 bits (1045), Expect = e-111
 Identities = 228/423 (53%), Positives = 286/423 (67%), Gaps = 14/423 (3%)
 Frame = +3

Query: 6    TEEQDLSQKGKRKTKGPRRYVPQKNSVAYALLITLYRGAANGIEFMKKQELIDAAEASGL 185
            +E +DL++KGKR TKG +RY+PQ+NSVAYALLITLYRG ++G EFM KQELIDA+EASGL
Sbjct: 84   SEPEDLTKKGKR-TKGTKRYMPQRNSVAYALLITLYRGTSSGNEFMHKQELIDASEASGL 142

Query: 186  SRVPIAPELGKGRQGQFVNSPKEWYSGWNAMSTLITKGLVAKSSNPAKYMLTQEGREAAR 365
            SRVPIAPE GKG+ G F +S ++WYSGW+ M TLI KGL+ KSS PAKYMLTQEG+EAAR
Sbjct: 143  SRVPIAPEKGKGKPGHFGSSSRDWYSGWSCMKTLIAKGLIVKSSCPAKYMLTQEGKEAAR 202

Query: 366  DCLSRSGLADSVDHSDTIGNFQSKDIQNASDSE-SDPDMSCEMAIPVNMSRQKKSVAIPS 542
            DCL+RSG+A+S++ S ++      D QN  D E +  D+  E+  P  +++QKK + +P 
Sbjct: 203  DCLARSGMAESIEMSSSVEIPSCMDNQNLLDVELNGHDLESEVLSP--LTQQKKPIDVPL 260

Query: 543  NSLE--------KEDRVDVLLPAGKRTRGKD-----PHATLNFDNVKNTGRGGNVLEENV 683
            + LE        KE  +       K    KD     P    +    +  G          
Sbjct: 261  DCLERFTQMGYSKEHIIGAFTEVSKSHPNKDVSSLWPAVLCHLREEQVYGSQPESQRSRD 320

Query: 684  RISSGGARHGLXXXXXXXXXQCSFTVRACSSSSNPIHNSLAHDATHANTNVLMVPPLRLG 863
             I        L            FT+RACSS+  P+ N    D   +  N+L VPPL LG
Sbjct: 321  LIVKDSRAVSLHVRNICSHDIPPFTLRACSSADRPMQNP-NKDELVSKLNILNVPPLSLG 379

Query: 864  ERFGDVYEVILILDDREQFVNSNKGHRSRKLIENIRIEFKIQLEVRRLPVGDAIWIARHR 1043
            ERF D Y+V+LILDDREQF  + +G RSRK+IENIR +FKIQ+EVRRLPVGD IWIARH+
Sbjct: 380  ERFEDAYDVVLILDDREQF--ATQGSRSRKIIENIRSQFKIQIEVRRLPVGDGIWIARHK 437

Query: 1044 ELGSEYVLDFIVERKGVDDLRCSIKDNRYRDQKLRLVRCGLQKLIYVVEGDPNACDAAET 1223
             L SEYVLDFIVERK  +DL  SI+DNRY+DQKLRL+RCGL+KLIY+VEGDPN+ +AAE+
Sbjct: 438  TLNSEYVLDFIVERKKTNDLCSSIRDNRYKDQKLRLLRCGLKKLIYLVEGDPNSSEAAES 497

Query: 1224 IKT 1232
            IKT
Sbjct: 498  IKT 500


>emb|CBI17741.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  405 bits (1041), Expect = e-110
 Identities = 242/455 (53%), Positives = 297/455 (65%), Gaps = 46/455 (10%)
 Frame = +3

Query: 6    TEEQDLSQKGKRKTKGPRRYVPQKNSVAYALLITLYRGAANGIEFMKKQELIDAAEASGL 185
            +E QDLS+KGK K KG +RY+PQKNSVAYALLI LYRG A G +FM KQ+LI+AAEASGL
Sbjct: 86   SEPQDLSEKGK-KAKGTKRYMPQKNSVAYALLIALYRGTATGSDFMGKQDLINAAEASGL 144

Query: 186  SRVPIAPELGKGRQGQFVNSPKEWYSGWNAMSTLITKGLVAKSSNPAKYMLTQEGREAAR 365
            SRVPI PE  KG++G F +S +EWYSGW+ M TLITKGLV KSS PAKYMLTQEGREAA 
Sbjct: 145  SRVPIVPEKEKGKRGHFGSSSREWYSGWSCMKTLITKGLVVKSSCPAKYMLTQEGREAAH 204

Query: 366  DCLSRSGLADSVDH-----SDTIGNFQSKDIQ--NASDSESDPDMSCEMAIPVNMSRQKK 524
            +CL RSGLAD +++     +  +G     D++  +A   E D   SC       ++ QKK
Sbjct: 205  ECLLRSGLADPIENLAATETTYLGTSNVLDLEFDHADLDEEDTIHSC-------LNGQKK 257

Query: 525  SVAIPSNSLEKEDRV------------DVLLPAGKRTRGK-------------------D 611
            SV +P  SLEK  R+            +V   + K+                       +
Sbjct: 258  SVDVPLESLEKFTRMGYTREEVLRAFTEVAETSQKKGMSSLWPAVLCCLRENQVYGFHSE 317

Query: 612  PHATLNFDNVK----NTGRGGNV--LEENVRISS--GGARHGLXXXXXXXXXQCSFTVRA 767
              A L  D +     +T   G V  + EN ++ S  GG              Q SFT+RA
Sbjct: 318  SQANLREDCLSTATTHTFIDGQVDLISENSQMDSACGGPLLMPKSSHPVDSVQSSFTLRA 377

Query: 768  CSSSSNPIHNSLAHDATHANTNVLMVPPLRLGERFGDVYEVILILDDREQFVNSNKGHRS 947
            CSSS  P+   L  D    N NVL +PPL +GERF DVYEV+LILDDREQF  + +G RS
Sbjct: 378  CSSSDYPVQK-LNSDGLKVNMNVLTMPPLLVGERFEDVYEVVLILDDREQF--TTQGSRS 434

Query: 948  RKLIENIRIEFKIQLEVRRLPVGDAIWIARHRELGSEYVLDFIVERKGVDDLRCSIKDNR 1127
            RK+IENI  +FKIQ+EVRRLPVGD IW+ARH+ L SEYVLDFIVERK V+DLRCSI+DNR
Sbjct: 435  RKIIENICTQFKIQIEVRRLPVGDGIWVARHKHLDSEYVLDFIVERKNVNDLRCSIRDNR 494

Query: 1128 YRDQKLRLVRCGLQKLIYVVEGDPNACDAAETIKT 1232
            Y+DQKLRL+RCGL+KLIY+VEGDPN+ +AAE+IKT
Sbjct: 495  YKDQKLRLLRCGLKKLIYLVEGDPNSSEAAESIKT 529


>ref|XP_002268085.2| PREDICTED: crossover junction endonuclease MUS81-like [Vitis
            vinifera]
          Length = 702

 Score =  393 bits (1009), Expect = e-107
 Identities = 245/484 (50%), Positives = 301/484 (62%), Gaps = 75/484 (15%)
 Frame = +3

Query: 6    TEEQDLSQKGKRKTKGPRRYVPQKNSVAYALLITLYRGAANGIEFMKKQELIDAAEASGL 185
            +E QDLS+KGK K KG +RY+PQKNSVAYALLI LYRG A G +FM KQ+LI+AAEASGL
Sbjct: 86   SEPQDLSEKGK-KAKGTKRYMPQKNSVAYALLIALYRGTATGSDFMGKQDLINAAEASGL 144

Query: 186  SRVPIAPELGKGRQGQFVNSPKEWYSGWNAMSTLITKGLVAKSSNPAKYMLTQEGREAAR 365
            SRVPI PE  KG++G F +S +EWYSGW+ M TLITKGLV KSS PAKYMLTQEGREAA 
Sbjct: 145  SRVPIVPEKEKGKRGHFGSSSREWYSGWSCMKTLITKGLVVKSSCPAKYMLTQEGREAAH 204

Query: 366  DCLSRSGLADSVDH-----SDTIGNFQSKDIQ--NASDSESDPDMSCEMAIPVNMSRQKK 524
            +CL RSGLAD +++     +  +G     D++  +A   E D   SC       ++ QKK
Sbjct: 205  ECLLRSGLADPIENLAATETTYLGTSNVLDLEFDHADLDEEDTIHSC-------LNGQKK 257

Query: 525  SVAIPSNSLEKEDRV------------DVLLPAGKRTRGK-------------------D 611
            SV +P  SLEK  R+            +V   + K+                       +
Sbjct: 258  SVDVPLESLEKFTRMGYTREEVLRAFTEVAETSQKKGMSSLWPAVLCCLRENQVYGFHSE 317

Query: 612  PHATLNFDNVK----NTGRGGNV--LEENVRISS--GGARHGLXXXXXXXXXQCSFTVRA 767
              A L  D +     +T   G V  + EN ++ S  GG              Q SFT+RA
Sbjct: 318  SQANLREDCLSTATTHTFIDGQVDLISENSQMDSACGGPLLMPKSSHPVDSVQSSFTLRA 377

Query: 768  CSSSS---------NP-------IHNS-------------LAHDATHANTNVLMVPPLRL 860
            CSSS          +P       +HNS             L  D    N NVL +PPL +
Sbjct: 378  CSSSILYGGCQLLLDPDLLFTIYLHNSCKSGYSDDYPVQKLNSDGLKVNMNVLTMPPLLV 437

Query: 861  GERFGDVYEVILILDDREQFVNSNKGHRSRKLIENIRIEFKIQLEVRRLPVGDAIWIARH 1040
            GERF DVYEV+LILDDREQF  + +G RSRK+IENI  +FKIQ+EVRRLPVGD IW+ARH
Sbjct: 438  GERFEDVYEVVLILDDREQF--TTQGSRSRKIIENICTQFKIQIEVRRLPVGDGIWVARH 495

Query: 1041 RELGSEYVLDFIVERKGVDDLRCSIKDNRYRDQKLRLVRCGLQKLIYVVEGDPNACDAAE 1220
            + L SEYVLDFIVERK V+DLRCSI+DNRY+DQKLRL+RCGL+KLIY+VEGDPN+ +AAE
Sbjct: 496  KHLDSEYVLDFIVERKNVNDLRCSIRDNRYKDQKLRLLRCGLKKLIYLVEGDPNSSEAAE 555

Query: 1221 TIKT 1232
            +IKT
Sbjct: 556  SIKT 559


>ref|XP_004166267.1| PREDICTED: LOW QUALITY PROTEIN: crossover junction endonuclease
            MUS81-like [Cucumis sativus]
          Length = 682

 Score =  391 bits (1004), Expect = e-106
 Identities = 223/432 (51%), Positives = 293/432 (67%), Gaps = 23/432 (5%)
 Frame = +3

Query: 6    TEEQDLSQKGKRKTKGPRRYVPQKNSVAYALLITLYRGAANGIEFMKKQELIDAAEASGL 185
            +E ++L+ KGK KTKG RRYVPQKNSVAYALLITLYRG  NG E+M+KQELIDAAEASGL
Sbjct: 88   SEPEELAGKGK-KTKGTRRYVPQKNSVAYALLITLYRGTTNGNEYMRKQELIDAAEASGL 146

Query: 186  SRVPIAPELGKGRQGQFVNSPKEWYSGWNAMSTLITKGLVAKSSNPAKYMLTQEGREAAR 365
            SRV IAPE GKG+  QF +S ++WYSGW+ M TLI++GLV KS+ PAKYMLT+EG++ AR
Sbjct: 147  SRVAIAPEKGKGKPSQFGSSSRDWYSGWSCMKTLISRGLVVKSNCPAKYMLTEEGQQVAR 206

Query: 366  DCLSRSGLADSVDHSD-TIGN--FQSKDIQNASDSESDPDMSCEMAIP-VNMSRQKKSVA 533
            +CL RSGL  S  + D T G+   +S DI N S +  D D+  E+  P V+ S + KS+ 
Sbjct: 207  ECLMRSGLLSSSKNFDNTKGSSILESCDISNHSANYLDSDV--EVTSPSVSQSTKHKSID 264

Query: 534  IPSNSLEKEDRVDV----LLPAGKRTRGKDPHATLN---------------FDNVKNTGR 656
            +P  SLE+  R+      ++ + K     +P+  ++               +  V+  GR
Sbjct: 265  VPLESLERFMRMGYSKHQVINSFKEVSKDNPNKDISSLWPAVLCRLREDLVYGQVEAIGR 324

Query: 657  GGNVLEENVRISSGGARHGLXXXXXXXXXQCSFTVRACSSSSNPIHNSLAHDATHANTNV 836
                +  ++  S                 + SF+ RACSSS+  I  S   D+   NTN+
Sbjct: 325  ENRSMGSSLEGSE-------PKNVVNVNGERSFSSRACSSSNPSIIES-RRDSVKGNTNI 376

Query: 837  LMVPPLRLGERFGDVYEVILILDDREQFVNSNKGHRSRKLIENIRIEFKIQLEVRRLPVG 1016
            L +PPL  GE+F D Y V+LILDDREQF   +   RSR++IENI  +FKIQ+E+RRLPVG
Sbjct: 377  LSMPPLSFGEKFEDCYNVVLILDDREQFAKHSS--RSRRMIENICSQFKIQIEIRRLPVG 434

Query: 1017 DAIWIARHRELGSEYVLDFIVERKGVDDLRCSIKDNRYRDQKLRLVRCGLQKLIYVVEGD 1196
            D IW+ARH+ L +EYVLDFIVERK V+DLRCSI+DNRYRDQKL+L+RCGL+++IY+VEGD
Sbjct: 435  DGIWVARHKHLDNEYVLDFIVERKDVEDLRCSIRDNRYRDQKLKLLRCGLKRMIYLVEGD 494

Query: 1197 PNACDAAETIKT 1232
            PN+ +AAE+IKT
Sbjct: 495  PNSSEAAESIKT 506