BLASTX nr result

ID: Coptis23_contig00028217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028217
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527087.1| Leucine-rich repeat receptor protein kinase ...   131   6e-29
ref|XP_002302156.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_004159472.1| PREDICTED: probable LRR receptor-like serine...   122   2e-26
ref|XP_004141006.1| PREDICTED: probable LRR receptor-like serine...   122   2e-26
ref|XP_003535558.1| PREDICTED: probable LRR receptor-like serine...   122   2e-26

>ref|XP_002527087.1| Leucine-rich repeat receptor protein kinase EXS precursor, putative
           [Ricinus communis] gi|223533510|gb|EEF35250.1|
           Leucine-rich repeat receptor protein kinase EXS
           precursor, putative [Ricinus communis]
          Length = 1075

 Score =  131 bits (329), Expect = 6e-29
 Identities = 67/94 (71%), Positives = 69/94 (73%)
 Frame = -3

Query: 284 WNPSHQTPCSWQGITCSPQNRVISLSLPNTFLNLSSIPPXXXXXXXXXXXXXXXXNISGL 105
           WNPS QTPCSWQGITCSPQNRVISLSLPNTFLNLSS+P                 NISG 
Sbjct: 57  WNPSSQTPCSWQGITCSPQNRVISLSLPNTFLNLSSLPSELSSLASLQLLNLSSTNISGT 116

Query: 104 IPPSFGHFTHLRLLDLSSNSLYGFIPSELGSLTS 3
           IPPSFG  THLRLLDLSSNSL G IP ELG L+S
Sbjct: 117 IPPSFGQLTHLRLLDLSSNSLSGSIPQELGLLSS 150


>ref|XP_002302156.1| predicted protein [Populus trichocarpa] gi|222843882|gb|EEE81429.1|
           predicted protein [Populus trichocarpa]
          Length = 941

 Score =  126 bits (317), Expect = 2e-27
 Identities = 65/94 (69%), Positives = 67/94 (71%)
 Frame = -3

Query: 284 WNPSHQTPCSWQGITCSPQNRVISLSLPNTFLNLSSIPPXXXXXXXXXXXXXXXXNISGL 105
           WNPS  TPCSWQGITCSPQNRV SLSLPNTFLNLSS+P                 NISG 
Sbjct: 41  WNPSSPTPCSWQGITCSPQNRVTSLSLPNTFLNLSSLPSQLSSLSSLQLVNLSSTNISGA 100

Query: 104 IPPSFGHFTHLRLLDLSSNSLYGFIPSELGSLTS 3
           IPPSFG  THLRLLDLSSNSL G IP ELG L+S
Sbjct: 101 IPPSFGLLTHLRLLDLSSNSLSGTIPQELGQLSS 134


>ref|XP_004159472.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g34110-like [Cucumis sativus]
          Length = 1136

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/94 (64%), Positives = 68/94 (72%)
 Frame = -3

Query: 284 WNPSHQTPCSWQGITCSPQNRVISLSLPNTFLNLSSIPPXXXXXXXXXXXXXXXXNISGL 105
           WNPS Q PC+W+GITCSPQNRVISLSLP TFLNLS +PP                N+SG 
Sbjct: 113 WNPSSQNPCAWEGITCSPQNRVISLSLPKTFLNLSFLPPELSSLSSLQLLNLSSTNVSGS 172

Query: 104 IPPSFGHFTHLRLLDLSSNSLYGFIPSELGSLTS 3
           IP SFG  THLRLLDLSSN+LYG IP +LGSL+S
Sbjct: 173 IPASFGLLTHLRLLDLSSNNLYGPIPPQLGSLSS 206


>ref|XP_004141006.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g34110-like [Cucumis sativus]
          Length = 1066

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/94 (64%), Positives = 68/94 (72%)
 Frame = -3

Query: 284 WNPSHQTPCSWQGITCSPQNRVISLSLPNTFLNLSSIPPXXXXXXXXXXXXXXXXNISGL 105
           WNPS Q PC+W+GITCSPQNRVISLSLP TFLNLS +PP                N+SG 
Sbjct: 43  WNPSSQNPCAWEGITCSPQNRVISLSLPKTFLNLSFLPPELSSLSSLQLLNLSSTNVSGS 102

Query: 104 IPPSFGHFTHLRLLDLSSNSLYGFIPSELGSLTS 3
           IP SFG  THLRLLDLSSN+LYG IP +LGSL+S
Sbjct: 103 IPASFGLLTHLRLLDLSSNNLYGPIPPQLGSLSS 136


>ref|XP_003535558.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g34110-like [Glycine max]
          Length = 1081

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/94 (63%), Positives = 69/94 (73%)
 Frame = -3

Query: 284 WNPSHQTPCSWQGITCSPQNRVISLSLPNTFLNLSSIPPXXXXXXXXXXXXXXXXNISGL 105
           WNPS  TPCSW+GITCSPQ RVISLS+P+TFLNLSS+PP                N+SG 
Sbjct: 58  WNPSSSTPCSWKGITCSPQGRVISLSIPDTFLNLSSLPPQLSSLSMLQLLNLSSTNVSGS 117

Query: 104 IPPSFGHFTHLRLLDLSSNSLYGFIPSELGSLTS 3
           IPPSFG  +HL+LLDLSSNSL G IP+ELG L+S
Sbjct: 118 IPPSFGQLSHLQLLDLSSNSLTGSIPAELGRLSS 151


Top