BLASTX nr result

ID: Coptis23_contig00028203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028203
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285311.2| PREDICTED: uncharacterized protein LOC100258...   274   2e-71
emb|CBI20226.3| unnamed protein product [Vitis vinifera]              274   2e-71
emb|CAN71664.1| hypothetical protein VITISV_011991 [Vitis vinifera]   273   3e-71
ref|XP_002525146.1| Transcription factor RF2a, putative [Ricinus...   257   2e-66
ref|XP_002275912.1| PREDICTED: uncharacterized protein LOC100243...   257   2e-66

>ref|XP_002285311.2| PREDICTED: uncharacterized protein LOC100258873 [Vitis vinifera]
          Length = 319

 Score =  274 bits (700), Expect = 2e-71
 Identities = 155/222 (69%), Positives = 167/222 (75%), Gaps = 20/222 (9%)
 Frame = -2

Query: 917 ERLDDEQLMSMFSDDVSGNAPQNVSTSNPSTPSDHNSINDVKT----TTLDQLP-KNEAG 753
           +RLDD+QLMSMFSDD+S   P  VS+S PSTPSD NS ND K       LDQ P KNE G
Sbjct: 96  DRLDDDQLMSMFSDDISLTVPPTVSSSGPSTPSDQNSNNDEKGDEKGAALDQQPPKNEPG 155

Query: 752 EVQSPCKQE-SQLPPSSTSTGDTNIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS 576
           EV+S CK E     PS+ S GD+ IDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS
Sbjct: 156 EVESSCKTELPSFRPSTASNGDSIIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS 215

Query: 575 LQTEVSTLSPRVAYLDHQRLVLNVDNSALKQRIAALAQDKIFKDAHQEALKKELERLRQV 396
           LQTEVS LSPRVA+LDHQRL+LNVDNSALKQRIAALAQDKIFKDAHQEALKKE+ERLRQV
Sbjct: 216 LQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQV 275

Query: 395 YQQQNLKNMGNT--------------NNTQIDTQGCTGKEQL 312
           Y QQ+LK MGN+                T     GCT K QL
Sbjct: 276 YHQQSLKKMGNSATGAPPQSTTRPHQTTTTDAAMGCTDKVQL 317


>emb|CBI20226.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  274 bits (700), Expect = 2e-71
 Identities = 155/222 (69%), Positives = 167/222 (75%), Gaps = 20/222 (9%)
 Frame = -2

Query: 917 ERLDDEQLMSMFSDDVSGNAPQNVSTSNPSTPSDHNSINDVKT----TTLDQLP-KNEAG 753
           +RLDD+QLMSMFSDD+S   P  VS+S PSTPSD NS ND K       LDQ P KNE G
Sbjct: 86  DRLDDDQLMSMFSDDISLTVPPTVSSSGPSTPSDQNSNNDEKGDEKGAALDQQPPKNEPG 145

Query: 752 EVQSPCKQE-SQLPPSSTSTGDTNIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS 576
           EV+S CK E     PS+ S GD+ IDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS
Sbjct: 146 EVESSCKTELPSFRPSTASNGDSIIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS 205

Query: 575 LQTEVSTLSPRVAYLDHQRLVLNVDNSALKQRIAALAQDKIFKDAHQEALKKELERLRQV 396
           LQTEVS LSPRVA+LDHQRL+LNVDNSALKQRIAALAQDKIFKDAHQEALKKE+ERLRQV
Sbjct: 206 LQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQV 265

Query: 395 YQQQNLKNMGNT--------------NNTQIDTQGCTGKEQL 312
           Y QQ+LK MGN+                T     GCT K QL
Sbjct: 266 YHQQSLKKMGNSATGAPPQSTTRPHQTTTTDAAMGCTDKVQL 307


>emb|CAN71664.1| hypothetical protein VITISV_011991 [Vitis vinifera]
          Length = 294

 Score =  273 bits (699), Expect = 3e-71
 Identities = 155/222 (69%), Positives = 167/222 (75%), Gaps = 20/222 (9%)
 Frame = -2

Query: 917 ERLDDEQLMSMFSDDVSGNAPQNVSTSNPSTPSDHNSINDVKT----TTLDQLP-KNEAG 753
           +RLDD+QLMSMFSDD+S   P  VS+S PSTPSD NS ND K       LDQ P KNE G
Sbjct: 71  DRLDDDQLMSMFSDDISLTVPPTVSSSGPSTPSDQNSNNDEKGDEKGAALDQQPPKNEPG 130

Query: 752 EVQSPCKQE-SQLPPSSTSTGDTNIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS 576
           EV+S CK E     PS+ S GD+ IDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS
Sbjct: 131 EVESSCKTELPSFRPSTASNGDSIIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS 190

Query: 575 LQTEVSTLSPRVAYLDHQRLVLNVDNSALKQRIAALAQDKIFKDAHQEALKKELERLRQV 396
           LQTEVS LSPRVA+LDHQRL+LNVDNSALKQRIAALAQDKIFKDAHQEALKKE+ERLRQV
Sbjct: 191 LQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQV 250

Query: 395 YQQQNLKNMGNT--------------NNTQIDTQGCTGKEQL 312
           Y QQ+LK MGN+                T     GCT K QL
Sbjct: 251 YHQQSLKKMGNSATGAPPQSTTQPHQTTTTDAAMGCTDKLQL 292


>ref|XP_002525146.1| Transcription factor RF2a, putative [Ricinus communis]
           gi|223535605|gb|EEF37273.1| Transcription factor RF2a,
           putative [Ricinus communis]
          Length = 325

 Score =  257 bits (657), Expect = 2e-66
 Identities = 140/191 (73%), Positives = 156/191 (81%), Gaps = 6/191 (3%)
 Frame = -2

Query: 917 ERLDDEQLMSMFSDDVSGNAPQNVSTSNPSTPSDHNSINDVKTTTLD----QLPKNEAGE 750
           ++ DDEQ MSMF+DD+S       S SNPSTPSDHNS ND K  TL     Q  +NE+ E
Sbjct: 113 DKFDDEQFMSMFNDDISNAVAP--SCSNPSTPSDHNSFNDEKEPTLSDQKQQKIRNESDE 170

Query: 749 VQSPCKQESQLPPSSTST--GDTNIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS 576
           VQS C+ ++Q P ++T+T   D  IDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS
Sbjct: 171 VQSQCQTDTQNPSNATNTTSSDRIIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTS 230

Query: 575 LQTEVSTLSPRVAYLDHQRLVLNVDNSALKQRIAALAQDKIFKDAHQEALKKELERLRQV 396
           LQ EVS LSPRVA+LDHQRL+LNVDNSALKQRIAALAQDKIFKDAHQEALK+E+ERLRQV
Sbjct: 231 LQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQV 290

Query: 395 YQQQNLKNMGN 363
           Y QQNLKNM N
Sbjct: 291 YHQQNLKNMEN 301


>ref|XP_002275912.1| PREDICTED: uncharacterized protein LOC100243740 [Vitis vinifera]
           gi|302143381|emb|CBI21942.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  257 bits (657), Expect = 2e-66
 Identities = 139/192 (72%), Positives = 158/192 (82%), Gaps = 7/192 (3%)
 Frame = -2

Query: 917 ERLDDEQLMSMFSDDVSGNAPQNVSTSNPSTPSDHNSINDVKTTTLDQLP-----KNEAG 753
           ++ DDEQ MSMF+D ++      +S+SNPSTPSDH S N+ KTTT++Q       KNE+ 
Sbjct: 88  DQFDDEQFMSMFTDAMA----PTISSSNPSTPSDHYSFNEEKTTTIEQQQQQQQLKNESE 143

Query: 752 EVQSPCKQESQLPP--SSTSTGDTNIDPKRVKRILANRQSAQRSRVRKLQYISELERSVT 579
           EVQS CK ESQ PP  S T++ D  +DPKRVKRILANRQSAQRSRVRKLQYISELERSVT
Sbjct: 144 EVQSSCKLESQTPPQPSMTTSNDRIVDPKRVKRILANRQSAQRSRVRKLQYISELERSVT 203

Query: 578 SLQTEVSTLSPRVAYLDHQRLVLNVDNSALKQRIAALAQDKIFKDAHQEALKKELERLRQ 399
           SLQTEVS LSPRVA+LDHQRL+LNVDNSALKQRIAALAQDKIFKDAHQ+ALK+E+ERLRQ
Sbjct: 204 SLQTEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQDALKREIERLRQ 263

Query: 398 VYQQQNLKNMGN 363
           VY QQNLK   N
Sbjct: 264 VYHQQNLKTTEN 275


Top