BLASTX nr result

ID: Coptis23_contig00028196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028196
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28339.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002277132.1| PREDICTED: CMP-N-acetylneuraminate-beta-gala...   125   3e-27
ref|XP_002306228.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
emb|CAN64919.1| hypothetical protein VITISV_027339 [Vitis vinifera]   124   8e-27
emb|CAJ15145.1| sialyltransferase-like protein [Gossypium raimon...   115   4e-24

>emb|CBI28339.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
 Frame = -3

Query: 332 GQGWHRSISFWRRENHHHGIRVRPHDGVMLNSLRSPRFFGKWFEFRRVLRDWFRNKRFQP 153
           GQG +R+ + WRR NH      R   GV +  LRSP+F+  W EFRR L DW+RNKRF P
Sbjct: 82  GQGRYRTFASWRRFNHIDD-HARSSRGVPIQ-LRSPKFYRYWLEFRRNLNDWYRNKRFHP 139

Query: 152 EIMLQLVDLVKRPLDKHYGFGNL-NRYASCAVVGNSGILLKTEYGELIDSH 3
           EIM  L+ LVK P+D+H G   L  RY+SCAVVGNSGILL+++YGE+IDSH
Sbjct: 140 EIMSDLIRLVKHPIDEHNGLVGLGKRYSSCAVVGNSGILLRSDYGEMIDSH 190


>ref|XP_002277132.1| PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,
           3-sialyltransferase 1-like [Vitis vinifera]
          Length = 389

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
 Frame = -3

Query: 332 GQGWHRSISFWRRENHHHGIRVRPHDGVMLNSLRSPRFFGKWFEFRRVLRDWFRNKRFQP 153
           GQG +R+ + WRR NH      R   GV +  LRSP+F+  W EFRR L DW+RNKRF P
Sbjct: 82  GQGRYRTFASWRRFNHIDD-HARSSRGVPIQ-LRSPKFYRYWLEFRRNLNDWYRNKRFHP 139

Query: 152 EIMLQLVDLVKRPLDKHYGFGNL-NRYASCAVVGNSGILLKTEYGELIDSH 3
           EIM  L+ LVK P+D+H G   L  RY+SCAVVGNSGILL+++YGE+IDSH
Sbjct: 140 EIMSDLIRLVKHPIDEHNGLVGLGKRYSSCAVVGNSGILLRSDYGEMIDSH 190


>ref|XP_002306228.1| predicted protein [Populus trichocarpa] gi|222849192|gb|EEE86739.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
 Frame = -3

Query: 329 QGWHRSISFWRRENHHHGIRVRPHDGVMLNSLRSPRFFGKWFEFRRVLRDWFRNKRFQPE 150
           +G +RS + WRR NHH  +R R   G+ L  LRSP+F+  W +FRR L DW R KR+QPE
Sbjct: 84  RGRYRSFATWRRFNHHD-VRARSSRGIPL-MLRSPQFYRYWLDFRRALHDWARKKRYQPE 141

Query: 149 IMLQLVDLVKRPLDKHYGF-GNLNRYASCAVVGNSGILLKTEYGELIDSH 3
           IM +L+ L+K P+D+H G  G+  RY SCAVVGNSGIL++ EYGELID H
Sbjct: 142 IMDELIGLLKGPIDRHNGLVGSERRYGSCAVVGNSGILMQKEYGELIDRH 191


>emb|CAN64919.1| hypothetical protein VITISV_027339 [Vitis vinifera]
          Length = 389

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
 Frame = -3

Query: 332 GQGWHRSISFWRRENHHHGIRVRPHDGVMLNSLRSPRFFGKWFEFRRVLRDWFRNKRFQP 153
           GQG +R+ + WRR N       R   GV +  LRSP+F+  W EFRR L DW+RNKRF P
Sbjct: 82  GQGRYRTFASWRRFNXXDD-HARSSRGVPIQ-LRSPKFYRYWLEFRRNLNDWYRNKRFHP 139

Query: 152 EIMLQLVDLVKRPLDKHYGFGNL-NRYASCAVVGNSGILLKTEYGELIDSH 3
           EIM  L+ LVK P+D+H G   L  RY+SCAVVGNSGILL++EYGE+IDSH
Sbjct: 140 EIMSDLIRLVKHPIDEHNGLVGLGKRYSSCAVVGNSGILLRSEYGEMIDSH 190


>emb|CAJ15145.1| sialyltransferase-like protein [Gossypium raimondii]
          Length = 384

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
 Frame = -3

Query: 332 GQGWHRSISFWRRENHHHGIRVRPHDGVMLNSLRSPRFFGKWFEFRRVLRDWFRNKRFQP 153
           GQG +R+ + WRR NHH  ++ R  +G+ +  LRSP+F+  W +FRR L+ W R + FQP
Sbjct: 77  GQGRYRTFATWRRFNHHD-VKARNSNGMPV-MLRSPKFYRYWLDFRRNLQHWARKRMFQP 134

Query: 152 EIMLQLVDLVKRPLDKHYG-FGNLNRYASCAVVGNSGILLKTEYGELIDSH 3
           +IM+ LV LVK P+D H G   + N+Y SCAVVGNSGILL T++G+ ID H
Sbjct: 135 DIMMDLVTLVKVPIDSHNGLMSSDNKYKSCAVVGNSGILLNTDHGKFIDGH 185


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