BLASTX nr result

ID: Coptis23_contig00028193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028193
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...   180   9e-44
ref|NP_178811.7| multidrug resistance-associated protein 11 [Ara...   180   1e-43
sp|Q9SKX0.3|AB13C_ARATH RecName: Full=ABC transporter C family m...   180   1e-43
ref|XP_002883764.1| ATMRP11 [Arabidopsis lyrata subsp. lyrata] g...   179   3e-43
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   174   7e-42

>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score =  180 bits (457), Expect = 9e-44
 Identities = 86/109 (78%), Positives = 99/109 (90%)
 Frame = +1

Query: 1    YSTSFYLVILCIFSIANSLLTLIRAFSFAFGGLRAAVHVHTELLDKLVSAPIHFFDETPS 180
            YSTSFYLV+LCIF + NS LTL+RAFSFAFGGLRAAV VH  LL KL++AP+HFFD+TP 
Sbjct: 781  YSTSFYLVVLCIFCVINSFLTLVRAFSFAFGGLRAAVQVHNTLLSKLINAPVHFFDKTPG 840

Query: 181  GRILNRLSSDLYTIDDALPFILNILLANFIGLVGLVIVLSYVQVVFLIL 327
            GRILNR+SSDLYTIDD+LPFILNILLAN +GL+G+ IVLSYVQVVFL+L
Sbjct: 841  GRILNRMSSDLYTIDDSLPFILNILLANIVGLLGIAIVLSYVQVVFLLL 889


>ref|NP_178811.7| multidrug resistance-associated protein 11 [Arabidopsis thaliana]
            gi|330251033|gb|AEC06127.1| multidrug
            resistance-associated protein 11 [Arabidopsis thaliana]
          Length = 1404

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/109 (77%), Positives = 101/109 (92%)
 Frame = +1

Query: 1    YSTSFYLVILCIFSIANSLLTLIRAFSFAFGGLRAAVHVHTELLDKLVSAPIHFFDETPS 180
            YSTSFYL++LCIF I NS+LTL+RAFSFAFGGL+AAVHVH  L+ KL++AP  FFD+TPS
Sbjct: 881  YSTSFYLMVLCIFCIINSILTLVRAFSFAFGGLKAAVHVHNALISKLINAPTQFFDQTPS 940

Query: 181  GRILNRLSSDLYTIDDALPFILNILLANFIGLVGLVIVLSYVQVVFLIL 327
            GRILNR SSDLYTIDD+LPFILNILLANF+GL+G+++VLSYVQV+FL+L
Sbjct: 941  GRILNRFSSDLYTIDDSLPFILNILLANFVGLLGIIVVLSYVQVLFLLL 989


>sp|Q9SKX0.3|AB13C_ARATH RecName: Full=ABC transporter C family member 13; Short=ABC
            transporter ABCC.13; Short=AtABCC13; AltName:
            Full=ATP-energized glutathione S-conjugate pump 11;
            AltName: Full=Glutathione S-conjugate-transporting ATPase
            11; AltName: Full=Multidrug resistance-associated protein
            11
          Length = 1410

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/109 (77%), Positives = 101/109 (92%)
 Frame = +1

Query: 1    YSTSFYLVILCIFSIANSLLTLIRAFSFAFGGLRAAVHVHTELLDKLVSAPIHFFDETPS 180
            YSTSFYL++LCIF I NS+LTL+RAFSFAFGGL+AAVHVH  L+ KL++AP  FFD+TPS
Sbjct: 887  YSTSFYLMVLCIFCIINSILTLVRAFSFAFGGLKAAVHVHNALISKLINAPTQFFDQTPS 946

Query: 181  GRILNRLSSDLYTIDDALPFILNILLANFIGLVGLVIVLSYVQVVFLIL 327
            GRILNR SSDLYTIDD+LPFILNILLANF+GL+G+++VLSYVQV+FL+L
Sbjct: 947  GRILNRFSSDLYTIDDSLPFILNILLANFVGLLGIIVVLSYVQVLFLLL 995


>ref|XP_002883764.1| ATMRP11 [Arabidopsis lyrata subsp. lyrata]
           gi|297329604|gb|EFH60023.1| ATMRP11 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1193

 Score =  179 bits (453), Expect = 3e-43
 Identities = 84/109 (77%), Positives = 101/109 (92%)
 Frame = +1

Query: 1   YSTSFYLVILCIFSIANSLLTLIRAFSFAFGGLRAAVHVHTELLDKLVSAPIHFFDETPS 180
           YSTSFYL++LCIF I NS+LTL+RAFSFAFGGL+AAVHVH+ L+ KL++AP  FFD+TPS
Sbjct: 670 YSTSFYLMVLCIFCIINSILTLVRAFSFAFGGLKAAVHVHSALISKLINAPTQFFDQTPS 729

Query: 181 GRILNRLSSDLYTIDDALPFILNILLANFIGLVGLVIVLSYVQVVFLIL 327
           GRILNR SSDLYTIDD+LPFILNILLANF+GL+G++ VLSYVQV+FL+L
Sbjct: 730 GRILNRFSSDLYTIDDSLPFILNILLANFVGLLGIIAVLSYVQVLFLLL 778


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1426

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/109 (76%), Positives = 96/109 (88%)
 Frame = +1

Query: 1    YSTSFYLVILCIFSIANSLLTLIRAFSFAFGGLRAAVHVHTELLDKLVSAPIHFFDETPS 180
            YS SFYLV+LCIF I NS LTL+RAFSFAFGGLRAAV VH  LL+KL+ AP+ FFD+TP 
Sbjct: 817  YSISFYLVVLCIFCIINSALTLVRAFSFAFGGLRAAVQVHNTLLNKLIDAPVQFFDQTPG 876

Query: 181  GRILNRLSSDLYTIDDALPFILNILLANFIGLVGLVIVLSYVQVVFLIL 327
            GRILNR SSDLYTIDD+LPFILNILLANF+GL+G+ ++LSYVQV FL+L
Sbjct: 877  GRILNRFSSDLYTIDDSLPFILNILLANFVGLLGIAVILSYVQVFFLLL 925


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