BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028177
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]   312   7e-83
ref|XP_002325124.1| f-box family protein [Populus trichocarpa] g...   290   4e-76
ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...   290   4e-76
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...   288   1e-75
ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform ...   283   3e-74

>ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]
          Length = 308

 Score =  312 bits (799), Expect = 7e-83
 Identities = 146/196 (74%), Positives = 170/196 (86%)
 Frame = +3

Query: 3   NFVAQRCSNLQVLSIKSCPNVRDSSIAKIASACLMLLELDISYCYEISHESLELIGRKCL 182
           +F A RCSNL+VLSIKSCPNV D+S+A++A  CL L E+DISYCYEISHESL L+GR C 
Sbjct: 113 SFAADRCSNLEVLSIKSCPNVTDASMARVAFRCLKLREVDISYCYEISHESLILLGRNCP 172

Query: 183 NLKILRRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAVIGKFMPHLKHLELRFSKLSA 362
           NLKIL+RNLMNWLDPSQH+GIVP EYL+ACPQ+G+ EAA IGK MPHL+HLELRFSK+SA
Sbjct: 173 NLKILKRNLMNWLDPSQHIGIVPNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISA 232

Query: 363 HGLVLITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERFVKPNFYIPRSVFHTERYG 542
            GL LI +GC  LEYLDL GCANLTSRD+  A++NLKNL++  KPNFYIPRSVFH ERYG
Sbjct: 233 KGLALICDGCLNLEYLDLSGCANLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHAERYG 292

Query: 543 HWRLYDERFQTNVFQI 590
           HWRLYD+RFQT+ F+I
Sbjct: 293 HWRLYDDRFQTDTFRI 308


>ref|XP_002325124.1| f-box family protein [Populus trichocarpa]
           gi|222866558|gb|EEF03689.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  290 bits (741), Expect = 4e-76
 Identities = 138/195 (70%), Positives = 162/195 (83%)
 Frame = +3

Query: 6   FVAQRCSNLQVLSIKSCPNVRDSSIAKIASACLMLLELDISYCYEISHESLELIGRKCLN 185
           F A+RCSNLQVLSIKSC NV D+S+A+IA  C  L ELDISYC+EISHESL ++GR C N
Sbjct: 120 FAAERCSNLQVLSIKSCRNVTDASMAQIAYKCAKLKELDISYCFEISHESLVMMGRNCPN 179

Query: 186 LKILRRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAVIGKFMPHLKHLELRFSKLSAH 365
           L++L+RN MNWLD S+H+GIVP  YL+ CPQ+G+ EA  IGK+MP+L HLELRFSK+SA 
Sbjct: 180 LRVLKRNQMNWLDASEHVGIVPDSYLNTCPQDGDCEAGAIGKYMPNLVHLELRFSKMSAK 239

Query: 366 GLVLITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERFVKPNFYIPRSVFHTERYGH 545
           GLV I EGC  LEYLDL GCANLTSRD+  A+  LKNL+   KPNFYIPRSVFHTERYGH
Sbjct: 240 GLVSICEGCLNLEYLDLSGCANLTSRDIVKATLGLKNLKEIKKPNFYIPRSVFHTERYGH 299

Query: 546 WRLYDERFQTNVFQI 590
           WRLYDERFQT++F+I
Sbjct: 300 WRLYDERFQTDIFRI 314


>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula]
           gi|355511349|gb|AES92491.1| F-box protein SKIP1
           [Medicago truncatula]
          Length = 302

 Score =  290 bits (741), Expect = 4e-76
 Identities = 137/194 (70%), Positives = 163/194 (84%)
 Frame = +3

Query: 9   VAQRCSNLQVLSIKSCPNVRDSSIAKIASACLMLLELDISYCYEISHESLELIGRKCLNL 188
           VAQRC NL+VLSI+SCP V D S++KIA+ C  L ELDISYCYEI+HESL LIGR C N+
Sbjct: 109 VAQRCPNLEVLSIRSCPRVTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNI 168

Query: 189 KILRRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAVIGKFMPHLKHLELRFSKLSAHG 368
           K+L+RNLMNWLDPSQH+GIVP +YL+ACPQ+G+ EAA I   MPHL+ LE+RFSKL+A G
Sbjct: 169 KVLKRNLMNWLDPSQHVGIVPDDYLNACPQDGDSEAAAIANSMPHLEGLEIRFSKLTAKG 228

Query: 369 LVLITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERFVKPNFYIPRSVFHTERYGHW 548
           L  I +GCP LE+LDL GCANLTSRD+  AS++L +L+   KPNFYIPRSVFHTERYGHW
Sbjct: 229 LNSICQGCPNLEFLDLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHW 288

Query: 549 RLYDERFQTNVFQI 590
            LYDERFQT+VF+I
Sbjct: 289 SLYDERFQTDVFRI 302


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
           [Medicago truncatula]
          Length = 302

 Score =  288 bits (737), Expect = 1e-75
 Identities = 136/194 (70%), Positives = 162/194 (83%)
 Frame = +3

Query: 9   VAQRCSNLQVLSIKSCPNVRDSSIAKIASACLMLLELDISYCYEISHESLELIGRKCLNL 188
           VAQRC NL+VLSI+SCP V D S++KIA+ C  L ELDISYCYEI+HESL LIGR C N+
Sbjct: 109 VAQRCPNLEVLSIRSCPRVTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNI 168

Query: 189 KILRRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAVIGKFMPHLKHLELRFSKLSAHG 368
           K+L+RNLMNWLDPSQH+GIVP +YL+ACPQ+G+ EA  I   MPHL+ LE+RFSKL+A G
Sbjct: 169 KVLKRNLMNWLDPSQHVGIVPDDYLNACPQDGDSEAVAIANSMPHLEGLEIRFSKLTAKG 228

Query: 369 LVLITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERFVKPNFYIPRSVFHTERYGHW 548
           L  I +GCP LE+LDL GCANLTSRD+  AS++L +L+   KPNFYIPRSVFHTERYGHW
Sbjct: 229 LNSICQGCPNLEFLDLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHW 288

Query: 549 RLYDERFQTNVFQI 590
            LYDERFQT+VF+I
Sbjct: 289 SLYDERFQTDVFRI 302


>ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform 1 [Glycine max]
          Length = 306

 Score =  283 bits (724), Expect = 3e-74
 Identities = 135/194 (69%), Positives = 160/194 (82%)
 Frame = +3

Query: 9   VAQRCSNLQVLSIKSCPNVRDSSIAKIASACLMLLELDISYCYEISHESLELIGRKCLNL 188
           VAQ C NL+VL I+SCP V D SI++IA +C  L ELDISYCYEI+HESL LIGR C NL
Sbjct: 113 VAQSCPNLEVLFIRSCPRVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNL 172

Query: 189 KILRRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAVIGKFMPHLKHLELRFSKLSAHG 368
           K+L+RNLMNWLDPSQH GIVP +YL+ACPQ+G++EAA I   MP L+ LE+RFSKL+A G
Sbjct: 173 KVLKRNLMNWLDPSQHRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKG 232

Query: 369 LVLITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERFVKPNFYIPRSVFHTERYGHW 548
           L  I +GCP LE+LDL GCANLTSRD+  AS++L +L+   KPNFYIPRSVFHTERYGHW
Sbjct: 233 LNSICQGCPNLEFLDLSGCANLTSRDIANASSSLVHLKEIKKPNFYIPRSVFHTERYGHW 292

Query: 549 RLYDERFQTNVFQI 590
            LYDERFQT++FQI
Sbjct: 293 SLYDERFQTDIFQI 306