BLASTX nr result

ID: Coptis23_contig00028168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028168
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18449.3| unnamed protein product [Vitis vinifera]              123   2e-26
gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japo...   107   1e-21
gb|EAZ09610.1| hypothetical protein OsI_31894 [Oryza sativa Indi...   107   1e-21
ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab...   100   1e-19
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p...    99   5e-19

>emb|CBI18449.3| unnamed protein product [Vitis vinifera]
          Length = 2154

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
 Frame = -1

Query: 294 ELPFFHDVEEKDSSCWSEFSIQSKLTARECRGWMCIPMLWFDVLVETNLSIFPISFSKAV 115
           ELPF  DVEEK SS WSE+S QSK+T+++CR W CIPMLW +VLVE N S+ PIS SKAV
Sbjct: 569 ELPFVLDVEEKHSSSWSEYSEQSKITSQDCRRWRCIPMLWLEVLVEINPSVLPISVSKAV 628

Query: 114 LWALSRFSMVELDSGLEMELSVRSWLSSYAGKI--SFTWE 1
            WA SRF++VE +   EME+ V++WLS  A +I  SF W+
Sbjct: 629 FWARSRFALVEPEKNAEMEVPVKNWLSFSAKEISSSFGWK 668


>gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japonica Group]
          Length = 2215

 Score =  107 bits (267), Expect = 1e-21
 Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
 Frame = -1

Query: 294 ELPFFHDVEEKDSSCWSEFSIQSKLTARECRGWMCIPMLWFDVLVETNLSIFPISFSKAV 115
           ELP F D EE D  CW++F++  KLT REC+ W C+P+LW+ ++V+   S  P++FSKAV
Sbjct: 440 ELPVFCDAEEMDYGCWNDFNVLYKLTCRECKDWRCVPLLWYLIMVQLEPSELPMAFSKAV 499

Query: 114 LWALSRFSMVELDSGLEMELSVRSWLSSYAGKI--SFTWE 1
            WALS  S++E     E  + V  WLSS+AG++  +F+W+
Sbjct: 500 FWALSHISVLEPGVSTESSVPVNDWLSSHAGEVLPTFSWQ 539


>gb|EAZ09610.1| hypothetical protein OsI_31894 [Oryza sativa Indica Group]
          Length = 2181

 Score =  107 bits (267), Expect = 1e-21
 Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
 Frame = -1

Query: 294 ELPFFHDVEEKDSSCWSEFSIQSKLTARECRGWMCIPMLWFDVLVETNLSIFPISFSKAV 115
           ELP F D EE D  CW++F++  KLT REC+ W C+P+LW+ ++V+   S  P++FSKAV
Sbjct: 416 ELPVFCDAEEMDYGCWNDFNVLYKLTCRECKDWRCVPLLWYLIMVQLEPSELPMAFSKAV 475

Query: 114 LWALSRFSMVELDSGLEMELSVRSWLSSYAGKI--SFTWE 1
            WALS  S++E     E  + V  WLSS+AG++  +F+W+
Sbjct: 476 FWALSHISVLEPGVSTESSVPVNDWLSSHAGEVLPTFSWQ 515


>ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
           lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein
           ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata]
          Length = 2129

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/95 (49%), Positives = 60/95 (63%)
 Frame = -1

Query: 291 LPFFHDVEEKDSSCWSEFSIQSKLTARECRGWMCIPMLWFDVLVETNLSIFPISFSKAVL 112
           LPF H  E+     WS+F+ QSK+T  EC+ WMCIPMLW   L  TNL   P+S S+AV 
Sbjct: 369 LPFSHIAEDVSDRSWSDFTQQSKITLGECKEWMCIPMLWITTLTNTNLLNLPVSLSQAVF 428

Query: 111 WALSRFSMVELDSGLEMELSVRSWLSSYAGKISFT 7
           WA SRF +VE +   EM + + +WLSS A +I  T
Sbjct: 429 WARSRFCLVESEKNDEMTVDIETWLSSSAVEIKGT 463


>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
           [Arabidopsis thaliana]
          Length = 2142

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/95 (47%), Positives = 59/95 (62%)
 Frame = -1

Query: 291 LPFFHDVEEKDSSCWSEFSIQSKLTARECRGWMCIPMLWFDVLVETNLSIFPISFSKAVL 112
           LPF H  E+     WS+F+ QSK+T  EC+ WMCIPMLW   L  TN    P+S S+AV 
Sbjct: 369 LPFSHTTEDVSDRSWSDFTQQSKITLGECKEWMCIPMLWITTLTNTNFLNLPVSLSQAVF 428

Query: 111 WALSRFSMVELDSGLEMELSVRSWLSSYAGKISFT 7
           W+ SRF +VE +   EM + + +WLSS A +I  T
Sbjct: 429 WSRSRFCLVESEKNDEMTVDIETWLSSSAVEIKGT 463


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