BLASTX nr result

ID: Coptis23_contig00028143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00028143
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002526725.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...   118   4e-25
ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258...   111   5e-23
ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...   111   7e-23

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
 Frame = -2

Query: 460 FDKDLDGVMGMNITTLRDYGVQECSIVWILVCQPRTLLVKNDRLKETVEAVIKMGFVPSS 281
           F +DL   +  N+  LR  GV +  I  +L   P  ++  ++   E VE V KMGF P+ 
Sbjct: 193 FLEDLSKNLIPNLELLRKVGVPQSCISLLLTHFPEAMMENHEEFSENVEEVRKMGFDPNK 252

Query: 280 RMFRYAVRAKAGVC-ESGWEAKWQGYRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEF 104
             F  AV A  G C +S WE  ++ Y++ G++ ++I+S FRK P+C+M S +KI KG++F
Sbjct: 253 STFVLAVHALCGKCNKSIWERCFEVYKRWGWTKDDILSAFRKHPHCMMLSEKKIMKGLDF 312

Query: 103 FTRKLRWKLGDICECPVILCLSLERRIVPRCNVL 2
           F  K+ W   +I  CPVIL LSLE+RI+PRC V+
Sbjct: 313 FVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVI 346


>ref|XP_002526725.1| conserved hypothetical protein [Ricinus communis]
           gi|223533914|gb|EEF35639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/142 (41%), Positives = 92/142 (64%)
 Frame = -2

Query: 427 NITTLRDYGVQECSIVWILVCQPRTLLVKNDRLKETVEAVIKMGFVPSSRMFRYAVRAKA 248
           NI  L++ G+ + SIVW+L   P TL+ K DR  ET+EAV ++G  PS   F  A+ A  
Sbjct: 243 NINLLKEVGLPQSSIVWLLRYHPATLMTKLDRFAETIEAVKRLGLNPSLINFVIAIHAMR 302

Query: 247 GVCESGWEAKWQGYRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDI 68
           G+ +S WE K+  Y+K G+S EE + VF K P+ +M S +KI K ++++  K+ W    I
Sbjct: 303 GMSKSTWEKKFDIYKKWGWSQEETLVVFGKFPWVMMYSEKKIMKMMDYYINKMGWDSSSI 362

Query: 67  CECPVILCLSLERRIVPRCNVL 2
            + P+++ LSLE+R++PRC+V+
Sbjct: 363 AKHPLLISLSLEKRVIPRCSVI 384


>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/150 (40%), Positives = 97/150 (64%)
 Frame = -2

Query: 460 FDKDLDGVMGMNITTLRDYGVQECSIVWILVCQPRTLLVKNDRLKETVEAVIKMGFVPSS 281
           F +D++  +  NIT L++ GV E SIV+++   P  + +K+DR  ETV+ V++MGF P +
Sbjct: 191 FLEDVNKNIVPNITALQEIGVPESSIVFLITYYPIVVQLKHDRFGETVKKVMEMGFDPLT 250

Query: 280 RMFRYAVRAKAGVCESGWEAKWQGYRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFF 101
            +F  A++   G+ +S WE K + YR+ G+S++EIV +FR  P C+  S +KI   ++F 
Sbjct: 251 VVFIKAIQVFGGMSKSTWEQKMEVYRRWGWSNDEIVLLFRAFPACMSLSEKKIMSTMDFL 310

Query: 100 TRKLRWKLGDICECPVILCLSLERRIVPRC 11
             K+ WKL +I   P+ L  +LE+RI+PRC
Sbjct: 311 VNKMGWKLTEITRFPISLGFNLEKRIIPRC 340


>ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258309 [Vitis vinifera]
           gi|297744182|emb|CBI37152.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/140 (39%), Positives = 86/140 (61%)
 Frame = -2

Query: 424 ITTLRDYGVQECSIVWILVCQPRTLLVKNDRLKETVEAVIKMGFVPSSRMFRYAVRAKAG 245
           IT L++ GV + S+V+++   P  + +KND+  E V+ V++ GF P   +F  A++  AG
Sbjct: 205 ITALQEIGVPQSSVVFLIKHYPYVVQLKNDKFHEIVKEVMESGFDPLKMVFITAIQVFAG 264

Query: 244 VCESGWEAKWQGYRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFFTRKLRWKLGDIC 65
           + +S WE K + YR+ G ++ EI+ +FR  P C+  S  KI   V+F   K+ WKL  I 
Sbjct: 265 MSKSTWEQKMEVYRRWGLTNHEIMLLFRGFPLCMSLSENKIMSTVDFLVNKMGWKLSAII 324

Query: 64  ECPVILCLSLERRIVPRCNV 5
             P+ L  SLE+RI+PRC+V
Sbjct: 325 RVPITLGYSLEKRIIPRCSV 344


>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/152 (37%), Positives = 91/152 (59%)
 Frame = -2

Query: 460 FDKDLDGVMGMNITTLRDYGVQECSIVWILVCQPRTLLVKNDRLKETVEAVIKMGFVPSS 281
           F +D++  +   IT L++ GV E S+V+++      + VK+D+  E V+ V++MGF P  
Sbjct: 193 FLEDVNKYIVPKITALQEIGVPESSVVFLITHYSNVVQVKHDKFHEIVKEVMEMGFDPLK 252

Query: 280 RMFRYAVRAKAGVCESGWEAKWQGYRKLGFSDEEIVSVFRKDPYCLMSSVEKIRKGVEFF 101
            +F  A+   AG+ +  WE K + YR+ G S+ EI+ +FR  P C+  S +KI   ++F 
Sbjct: 253 MVFIKAIHVLAGMSKPTWEHKMEVYRRWGLSNHEIMLLFRAFPICMSLSEKKIMSTMDFL 312

Query: 100 TRKLRWKLGDICECPVILCLSLERRIVPRCNV 5
             K+ WKL  I + P  L  SLE+RI+PRC+V
Sbjct: 313 VNKMGWKLTAITKVPSTLSYSLEKRIIPRCSV 344


Top